X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=blastdb.hpp;h=9b8965d017b69a8f8cf27884261ea1095f77e176;hb=1cf188b912d6da8f2cd03dd71cecef664a699c1a;hp=0f8fccd7f19507737642e218e4a149c5f4a60e0b;hpb=9ada98592a54c82d08f3d46c9b1d8c3e472a922d;p=mothur.git

diff --git a/blastdb.hpp b/blastdb.hpp
index 0f8fccd..9b8965d 100644
--- a/blastdb.hpp
+++ b/blastdb.hpp
@@ -12,19 +12,19 @@
  */
 
 #include "mothur.h"
-#include "globaldata.hpp"
 
 class BlastDB : public Database {
 
 public:
 	BlastDB(float, float, float, float);
+	BlastDB();
 	~BlastDB();
 	
 	void generateDB();
 	void addSequence(Sequence);
 	vector<int> findClosestSequences(Sequence*, int);
-	vector<int> findClosestMegaBlast(Sequence*, int);
-
+	vector<int> findClosestMegaBlast(Sequence*, int, int);
+	
 private:
 	string dbFileName;
 	string queryFileName;
@@ -36,7 +36,7 @@ private:
 	float gapExtend;
 	float match;
 	float misMatch;
-	GlobalData* globaldata;
+	
 };
 
 #endif