X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=blastalign.hpp;h=5b78da6b635770b53453cf9b6ec84493b17bf71a;hb=8dd3c225255d7084e3aff8740aa4f1f1cabb367a;hp=696c134375785698c1c15649fef4adc2df783a4a;hpb=36a8526766106bce1412e530e99f9c699dd59105;p=mothur.git

diff --git a/blastalign.hpp b/blastalign.hpp
index 696c134..5b78da6 100644
--- a/blastalign.hpp
+++ b/blastalign.hpp
@@ -12,7 +12,7 @@
  */
  
 #include "mothur.h"
-#include "globaldata.hpp"
+
 
 class BlastAlignment : public Alignment {
 
@@ -20,6 +20,8 @@ public:
 	BlastAlignment(float, float, float, float);
 	~BlastAlignment();
 	void align(string, string);
+	void setMatrix(int){};
+	
 private:
 
 	string candidateFileName;
@@ -32,6 +34,5 @@ private:
 	float mismatch;
 	float gapOpen;
 	float gapExtend;
-	GlobalData* globaldata;
 };