X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=binsequencecommand.h;fp=binsequencecommand.h;h=e2ff648283a9c00569a8d2a4170a040b4a494902;hb=81a77fdce5e9b060c71b162305ddd9fa4308f78a;hp=617f5ec7ac98f17f358c383ca424ebd817cb3227;hpb=b1ac9e686514752c0aa7df045a3b2ab70ceaec89;p=mothur.git diff --git a/binsequencecommand.h b/binsequencecommand.h index 617f5ec..e2ff648 100644 --- a/binsequencecommand.h +++ b/binsequencecommand.h @@ -16,6 +16,7 @@ #include "listvector.hpp" #include "readotu.h" #include "fastamap.h" +#include "groupmap.h" class GlobalData; @@ -33,7 +34,8 @@ private: ReadOTUFile* read; InputData* input; FastaMap* fasta; - string filename, fastafile, namesfile; + GroupMap* groupMap; + string filename, fastafile, namesfile, groupfile; ofstream out; ifstream in, inNames;