X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=binsequencecommand.cpp;h=f9784b3ea91e09d1c0d86232b67b70bc5e789b99;hb=b8c3b380cf57a8048658d365b73a61c8592f83da;hp=7798a4d74f749eed04d4554c796776a58697b98b;hpb=1a5c2356c1b955c6ec024b2baf9f46377ee7c72e;p=mothur.git

diff --git a/binsequencecommand.cpp b/binsequencecommand.cpp
index 7798a4d..f9784b3 100644
--- a/binsequencecommand.cpp
+++ b/binsequencecommand.cpp
@@ -249,7 +249,7 @@ int BinSeqCommand::execute(){
 		
 		//if user gave a namesfile then use it
 		if (namesfile != "") {  readNamesFile();  }
-        if (countfile != "") {  ct.readTable(countfile);  }
+        if (countfile != "") {  ct.readTable(countfile, true, false);  }
 		
 		input = new InputData(listfile, "list");
 		list = input->getListVector();