X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bcftools%2Fvcfutils.pl;h=eed8766464e9b63e08268a97b146d3464705a042;hb=032937695157a15fb0ce042deda22afc30be1616;hp=0506c5dbacb4e4480eebf4eab5990787d423c7f9;hpb=a77f3af6a56f643bcf77c52708e6f692af1fe7d3;p=samtools.git diff --git a/bcftools/vcfutils.pl b/bcftools/vcfutils.pl index 0506c5d..eed8766 100755 --- a/bcftools/vcfutils.pl +++ b/bcftools/vcfutils.pl @@ -322,8 +322,8 @@ sub filter4vcf { die(qq/ Usage: vcfutils.pl filter4vcf [options] -Options: -d INT min total depth (given DP or DP4) [$opts{D}] - -D INT max total depth [$opts{d}] +Options: -d INT min total depth (given DP or DP4) [$opts{d}] + -D INT max total depth [$opts{D}] -q INT min SNP quality [$opts{q}] -Q INT min RMS mapQ (given MQ) [$opts{Q}] -1 FLOAT min P-value for strand bias (given PV4) [$opts{1}]