X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bcftools%2Fprob1.h;h=eb4dc9216c27358712c98ec6444f5ea249ad6242;hb=f528e7da717a1a2a6ab2672c7c55f37d315452f3;hp=b4f6a304ae49ff31f9ef9ae88db268cd3f01640e;hpb=727b8c146c0146f6c43b2a7ab75c4c7bc3f91eef;p=samtools.git

diff --git a/bcftools/prob1.h b/bcftools/prob1.h
index b4f6a30..eb4dc92 100644
--- a/bcftools/prob1.h
+++ b/bcftools/prob1.h
@@ -22,7 +22,7 @@ typedef struct {
 extern "C" {
 #endif
 
-	bcf_p1aux_t *bcf_p1_init(int n);
+	bcf_p1aux_t *bcf_p1_init(int n, uint8_t *ploidy);
 	void bcf_p1_init_prior(bcf_p1aux_t *ma, int type, double theta);
 	void bcf_p1_init_subprior(bcf_p1aux_t *ma, int type, double theta);
 	void bcf_p1_destroy(bcf_p1aux_t *ma);
@@ -30,7 +30,6 @@ extern "C" {
 	int bcf_p1_call_gt(const bcf_p1aux_t *ma, double f0, int k);
 	void bcf_p1_dump_afs(bcf_p1aux_t *ma);
 	int bcf_p1_read_prior(bcf_p1aux_t *ma, const char *fn);
-	long double bcf_p1_cal_g3(bcf_p1aux_t *p1a, double g[3]);
 	int bcf_p1_set_n1(bcf_p1aux_t *b, int n1);
 	void bcf_p1_set_folded(bcf_p1aux_t *p1a); // only effective when set_n1() is not called