X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bcftools%2FMakefile;h=e3b92e9d29f96734495a4acb0c536642a1918d42;hb=390bbfbca2df79acf521706409a258895dfe72b1;hp=d2db8315c48fb29b7ed31f5b874e4bf6b6ab32c2;hpb=a90c2f68b793d5c35df8943bc0264024fb270f4a;p=samtools.git

diff --git a/bcftools/Makefile b/bcftools/Makefile
index d2db831..e3b92e9 100644
--- a/bcftools/Makefile
+++ b/bcftools/Makefile
@@ -1,9 +1,9 @@
 CC=			gcc
-CFLAGS=		-g -Wall #-O2 #-fPIC #-m64 #-arch ppc
-DFLAGS=		-D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE
-LOBJS=		bcf.o vcf.o bcfutils.o prob1.o index.o
+CFLAGS=		-g -Wall -O2 #-m64 #-arch ppc
+DFLAGS=		-D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE -D_BCF_QUAD
+LOBJS=		bcf.o vcf.o bcfutils.o prob1.o kfunc.o index.o fet.o
 OMISC=		..
-AOBJS=		vcfout.o main.o $(OMISC)/kstring.o $(OMISC)/bgzf.o $(OMISC)/knetfile.o
+AOBJS=		call1.o main.o $(OMISC)/kstring.o $(OMISC)/bgzf.o $(OMISC)/knetfile.o
 PROG=		bcftools
 INCLUDES=	
 SUBDIRS=	.