X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bayesian.h;fp=bayesian.h;h=0020962f4276c9deb2129a27b2d69974783aab82;hb=a5afca18544555fba2d9c3670ad1f8574916b0a0;hp=9b93c839c9e5a4a749bf190c1bd95200fc82f272;hpb=4ba6188707e67c638ea5ee3c787d5d07ccd07e3e;p=mothur.git

diff --git a/bayesian.h b/bayesian.h
index 9b93c83..0020962 100644
--- a/bayesian.h
+++ b/bayesian.h
@@ -18,7 +18,7 @@
 class Bayesian : public Classify {
 	
 public:
-	Bayesian(string, string, string, int, int);
+	Bayesian(string, string, string, int, int, bool);
 	~Bayesian() {};
 	
 	string getTaxonomy(Sequence*);
@@ -36,6 +36,7 @@ private:
 	vector<int> genusNodes;  //indexes in phyloTree where genus' are located
 	
 	int kmerSize, numKmers, confidenceThreshold;
+	bool probs;
 	
 	string bootstrapResults(vector<int>, int, int);
 	int getMostProbableTaxonomy(vector<int>);