X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bam_plcmd.c;h=d03bab10af0efe28cbda757b3c7e1a7150bfde1d;hb=8e0cda946df67b944828a049dea8315f33b9f7af;hp=27f67629337b89385080e1904deb80e4dd313d50;hpb=75777ee24e3856598bbe24683656148915755b53;p=samtools.git diff --git a/bam_plcmd.c b/bam_plcmd.c index 27f6762..d03bab1 100644 --- a/bam_plcmd.c +++ b/bam_plcmd.c @@ -877,7 +877,7 @@ int bam_mpileup(int argc, char *argv[]) case 'g': mplp.flag |= MPLP_GLF; break; case 'u': mplp.flag |= MPLP_NO_COMP | MPLP_GLF; break; case 'a': mplp.flag |= MPLP_NO_ORPHAN | MPLP_REALN; break; - case 'B': mplp.flag &= ~MPLP_REALN & ~MPLP_NO_ORPHAN; break; + case 'B': mplp.flag &= ~MPLP_REALN; break; case 'R': mplp.flag |= MPLP_REALN; break; case 'D': mplp.flag |= MPLP_FMT_DP; break; case 'S': mplp.flag |= MPLP_FMT_SP; break;