X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bam_plcmd.c;h=bbdca64d4cc38ac4edde1691f527a886880eac2b;hb=7f8bb285b631bd30a116ff5b5495563c7f5438f2;hp=a1c87ab6f67831fe4f949a4625f5cd685b72317d;hpb=fb9ec864a4db78d58c5aba13c6c24ce4b610ab57;p=samtools.git diff --git a/bam_plcmd.c b/bam_plcmd.c index a1c87ab..bbdca64 100644 --- a/bam_plcmd.c +++ b/bam_plcmd.c @@ -701,7 +701,7 @@ int bam_mpileup(int argc, char *argv[]) fprintf(stderr, " -M INT cap mapping quality at INT [%d]\n", mplp.max_mq); fprintf(stderr, " -q INT filter out alignment with MQ smaller than INT [%d]\n", mplp.min_mq); fprintf(stderr, " -t FLOAT scaled mutation rate [%lg]\n", mplp.theta); - fprintf(stderr, " -P STR prior: full, flat, cond2 [full]"); + fprintf(stderr, " -P STR prior: full, flat, cond2 [full]\n"); fprintf(stderr, " -c generate VCF output (consensus calling)\n"); fprintf(stderr, " -v show variant sites only\n"); fprintf(stderr, " -S calculate AFS (slow, to stderr)\n");