X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bam2bcf.h;h=a31ac9dece3d7ed9a6f740e3452985c50abc6c67;hb=700d451b57c06a5fc842b24be0d69d4a251c91df;hp=a4d8ca5128319800c91303a022a4e53ac6aea599;hpb=543a9fc2055575dcc17a7bb9c83ecca17a32cec6;p=samtools.git

diff --git a/bam2bcf.h b/bam2bcf.h
index a4d8ca5..a31ac9d 100644
--- a/bam2bcf.h
+++ b/bam2bcf.h
@@ -16,6 +16,7 @@ typedef struct __bcf_callaux_t {
 	int openQ, extQ, tandemQ; // for indels
 	int min_support; // for collecting indel candidates
 	double min_frac; // for collecting indel candidates
+    int per_sample_flt; // indel filtering strategy
 	// for internal uses
 	int max_bases;
 	int indel_types[4];