X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bam2bcf.h;h=26b022c08e89e3597bd6e400690d42bd7ecabe38;hb=95b7e2d5d54f2b10bef8dd937e43c342d2086b46;hp=e0673e5e868b3ab4babcd0726f76ff301c42e9be;hpb=21981f77249600eaf1ba655a8dd6fdbb61e90e2e;p=samtools.git

diff --git a/bam2bcf.h b/bam2bcf.h
index e0673e5..26b022c 100644
--- a/bam2bcf.h
+++ b/bam2bcf.h
@@ -21,7 +21,7 @@ typedef struct __bcf_callaux_t {
 } bcf_callaux_t;
 
 typedef struct {
-	int depth, qsum[4];
+	int depth, ori_depth, qsum[4];
 	int anno[16];
 	float p[25];
 } bcf_callret1_t;
@@ -29,7 +29,7 @@ typedef struct {
 typedef struct {
 	int a[5]; // alleles: ref, alt, alt2, alt3
 	int n, n_alleles, shift, ori_ref, unseen;
-	int anno[16], depth;
+	int anno[16], depth, ori_depth;
 	uint8_t *PL;
 } bcf_call_t;