X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bam2bcf.h;fp=bam2bcf.h;h=e39ab7bfe90a6a6ec2a51f27e1325c32a1e4f2b5;hb=917ed8ca3a137ff2c2db887c0c72f3cce09f7df4;hp=94207d092e151f48b64d2380e1e71c1493f2e155;hpb=53afc90ef53f3c5cd3060377f16828363f55ed00;p=samtools.git

diff --git a/bam2bcf.h b/bam2bcf.h
index 94207d0..e39ab7b 100644
--- a/bam2bcf.h
+++ b/bam2bcf.h
@@ -36,7 +36,7 @@ extern "C" {
 
 	bcf_callaux_t *bcf_call_init(double theta, int min_baseQ);
 	void bcf_call_destroy(bcf_callaux_t *bca);
-	int bcf_call_glfgen(int _n, const bam_pileup1_t *pl, int ref_base /*4-bit*/, bcf_callaux_t *bca, bcf_callret1_t *r);
+	int bcf_call_glfgen(int _n, const bam_pileup1_t *pl, int ref_base, bcf_callaux_t *bca, bcf_callret1_t *r);
 	int bcf_call_combine(int n, const bcf_callret1_t *calls, int ref_base /*4-bit*/, bcf_call_t *call);
 	int bcf_call2bcf(int tid, int pos, bcf_call_t *bc, bcf1_t *b, bcf_callret1_t *bcr, int is_SP);
 	int bcf_call_gap_prep(int n, int *n_plp, bam_pileup1_t **plp, int pos, bcf_callaux_t *bca, const char *ref);