X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bam2bcf.c;h=f263fad55a5d1f1438fd50d127fb2362309f100b;hb=3384f6c6c1642ada4edae9204ca1202672de7d5a;hp=bd5503d7e55cef2479c1a8d12d3dc0855eab06f2;hpb=4d48006473298b62ee54f13d706f9f2e512e02bd;p=samtools.git

diff --git a/bam2bcf.c b/bam2bcf.c
index bd5503d..f263fad 100644
--- a/bam2bcf.c
+++ b/bam2bcf.c
@@ -236,7 +236,7 @@ int bcf_call2bcf(int tid, int pos, bcf_call_t *bc, bcf1_t *b, bcf_callret1_t *bc
 	memcpy(b->gi[0].data, bc->PL, b->gi[0].len * bc->n);
 	if (bcr) {
 		uint16_t *dp = (uint16_t*)b->gi[1].data;
-		uint8_t *sp = is_SP? b->gi[2].data : 0;
+		int32_t *sp = is_SP? b->gi[2].data : 0;
 		for (i = 0; i < bc->n; ++i) {
 			bcf_callret1_t *p = bcr + i;
 			dp[i] = p->depth < 0xffff? p->depth : 0xffff;