X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bam.h;h=f3f37f3ecefff6509b7480c52eed0f0090a1fd2f;hb=eb4c2ebca7bd29d3b850baf9b57c342742d06788;hp=df345b6e47afcbcbdf545e9f954277b78825272b;hpb=543a9fc2055575dcc17a7bb9c83ecca17a32cec6;p=samtools.git

diff --git a/bam.h b/bam.h
index df345b6..f3f37f3 100644
--- a/bam.h
+++ b/bam.h
@@ -40,7 +40,7 @@
   @copyright Genome Research Ltd.
  */
 
-#define BAM_VERSION "0.1.18-dev (r982:310)"
+#define BAM_VERSION "0.1.18-r572"
 
 #include <stdint.h>
 #include <stdlib.h>
@@ -776,5 +776,17 @@ static inline int bam_aux_type2size(int x)
 	else return 0;
 }
 
+/*********************************
+ *** Compatibility with htslib ***
+ *********************************/
+
+typedef bam_header_t bam_hdr_t;
+
+#define bam_get_qname(b) bam1_qname(b)
+#define bam_get_cigar(b) bam1_cigar(b)
+
+#define bam_hdr_read(fp) bam_header_read(fp)
+#define bam_hdr_write(fp, h) bam_header_write(fp, h)
+#define bam_hdr_destroy(fp) bam_header_destroy(fp)
 
 #endif