X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=alignmentdb.h;h=537af8d21548e118a8d7470133be1acd4aab11fb;hb=a0f1fca79d2ddfa7ad36b4485039c68b5704fe8d;hp=a69b917388fcabb052ab453a4c9e8e93e55e3fb6;hpb=fdc1f6eaf544f695fc1511f24bddd7e6069c33ba;p=mothur.git

diff --git a/alignmentdb.h b/alignmentdb.h
index a69b917..537af8d 100644
--- a/alignmentdb.h
+++ b/alignmentdb.h
@@ -20,18 +20,16 @@ class AlignmentDB {
 
 public:
 
-	AlignmentDB(string, string, int, float, float, float, float);  //reads fastafile passed in and stores sequences
+	AlignmentDB(string, string, int, float, float, float, float, int);  //reads fastafile passed in and stores sequences
 	AlignmentDB(string);
 	~AlignmentDB();
 	
 	Sequence findClosestSequence(Sequence*);
 	float getSearchScore()  {  return search->getSearchScore();  }
 	int getLongestBase()	{  return longest;  }
-	int MPISend(int);
-	int MPIRecv(int);
 	
 private:
-	int numSeqs, longest;
+	int numSeqs, longest, threadID;
 	string method;
 	
 	Database* search;