X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=aligncommand.h;h=86bb4d7a4377904f0ca3c2712204d5932fdb46f6;hb=72e0be6b9c80009d4dbee24e8d690ad9514dc6fb;hp=d42369520f127a8ba06c1c86ae9e9929c20f4fac;hpb=dcec3fbce6cb84a97c33f56fa4a41546e3b0e293;p=mothur.git

diff --git a/aligncommand.h b/aligncommand.h
index d423695..86bb4d7 100644
--- a/aligncommand.h
+++ b/aligncommand.h
@@ -1,6 +1,6 @@
 #ifndef ALIGNCOMMAND_H
 #define ALIGNCOMMAND_H
-
+//test
 /*
  *  aligncommand.h
  *  Mothur
@@ -10,7 +10,6 @@
  *
  */
 
-#include "mothur.h"
 #include "command.hpp"
 #include "database.hpp"
 #include "alignment.hpp"
@@ -25,7 +24,7 @@
 #include "nast.hpp"
 #include "nastreport.hpp"
 
-
+//test
 class AlignCommand : public Command {
 	
 public:
@@ -120,7 +119,7 @@ struct alignData {
 };
 
 /**************************************************************************************************/
-#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)
+#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux) || (__linux__) || (__unix__) || (__unix)
 #else
 static DWORD WINAPI MyAlignThreadFunction(LPVOID lpParam){ 
 	alignData* pDataArray;