X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=WHAT_IS_NEW;h=4a777d5a7ef832df7c2b634058967a0ed2930fff;hb=1d786dca8b4c9c1e2176a28a669d2d16cd93e395;hp=4e1690d3618661b9f3be45a9a36e2d21fad5ed38;hpb=e3d5553e8d1f798a6a36a348ddba475b0f4f1528;p=rsem.git diff --git a/WHAT_IS_NEW b/WHAT_IS_NEW index 4e1690d..4a777d5 100644 --- a/WHAT_IS_NEW +++ b/WHAT_IS_NEW @@ -1,3 +1,33 @@ +RSEM v1.2.6 + +- Install the latest version of EBSeq from Bioconductor and if fails, try to install EBSeq v1.1.5 locally +- Fixed a bug in 'rsem-gen-transcript-plots', which makes 'rsem-plot-transcript-wiggles' fail + +-------------------------------------------------------------------------------------------- + +RSEM v1.2.5 + +- Updated EBSeq from v1.1.5 to v1.1.6 +- Fixed a bug in 'rsem-generate-data-matrix', which can cause 'rsem-find-DE' to crash + +-------------------------------------------------------------------------------------------- + +RSEM v1.2.4 + +- Fixed a bug that leads to poor parallelization performance in Mac OS systems +- Fixed a problem that may halt the 'rsem-gen-transcript-plots", thanks Han Lin for pointing out the problem and suggesting possible fixes +- Added some user-friendly error messages for converting transcript BAM files into genomic BAM files +- Modified rsem-tbam2gbam so that the original alignment quality MAPQ will be preserved if the input bam is not from RSEM +- Added user-friendly error messages if users forget to compile the source codes + +-------------------------------------------------------------------------------------------- + +RSEM v1.2.3 + +- Fixed a bug in 'EBSeq/rsem-for-ebseq-generate-ngvector-from-clustering-info' which may crash the script + +-------------------------------------------------------------------------------------------- + RSEM v1.2.2 - Updated EBSeq to v1.1.5