X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=README;h=498f4be06dc0ecc00162c43cdaa65841cea5dff8;hb=4106e787c888bb743fdd778e4f3a9d241cc895f5;hp=639bfd107d103185d08973bd77cf79a736271233;hpb=3ba4b5eb3f88fd8f24af8bf83ba218b84faa87ba;p=bamtools.git diff --git a/README b/README index 639bfd1..498f4be 100644 --- a/README +++ b/README @@ -1,11 +1,60 @@ ---------------- -README ----------------- +-------------------------------------------------------------------------------- +README : BAMTOOLS +-------------------------------------------------------------------------------- -Copy the 4 header files (*.h) and the library file (libbambc.a) to your directory. +BamTools provides both a programmer's API and an end-user's toolkit for handling +BAM files. -When you compile your program, add this to the g++ command: +I. Learn More - -lz -L. -lbambc +II. License -and you should be good to go. (Those are lower case l's, as in 'lion'.) +III. Acknowledgements + +IV. Contact + +-------------------------------------------------------------------------------- +I. Learn More: +-------------------------------------------------------------------------------- + +Installation steps, tutorial, API documentation, etc. are all now available +through the BamTools project wiki: + +https://github.com/pezmaster31/bamtools/wiki + +Join the mailing list(s) to stay informed of updates or get involved with +contributing: + +https://github.com/pezmaster31/bamtools/wiki/Mailing-lists + +-------------------------------------------------------------------------------- +II. License : +-------------------------------------------------------------------------------- + +Both the BamTools API and toolkit are released under the MIT License. +Copyright (c) 2009-2010 Derek Barnett, Erik Garrison, Gabor Marth, + Michael Stromberg + +See included file LICENSE for details. + +-------------------------------------------------------------------------------- +III. Acknowledgements : +-------------------------------------------------------------------------------- + + * Aaron Quinlan for several key feature ideas and bug fix contributions + * Baptiste Lepilleur for the public-domain JSON parser (JsonCPP) + * Heng Li, author of SAMtools - the original C-language BAM API/toolkit. + +-------------------------------------------------------------------------------- +IV. Contact : +-------------------------------------------------------------------------------- + +Feel free to contact me with any questions, comments, suggestions, bug reports, + etc. + +Derek Barnett +Marth Lab +Biology Dept., Boston College + +Email: derekwbarnett@gmail.com +Project Website: http://github.com/pezmaster31/bamtools