X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=R%2Fladderize.R;h=596a8fdd7aca261b89e89009388d5f54c0aec8a1;hb=refs%2Fheads%2Fmaster;hp=8d2e94a240010eee9a17eb6b763777b66744128d;hpb=c827059eeafc8cbe41c812b26979543ab287803e;p=ape.git diff --git a/R/ladderize.R b/R/ladderize.R index 8d2e94a..596a8fd 100644 --- a/R/ladderize.R +++ b/R/ladderize.R @@ -23,7 +23,7 @@ ladderize <- function(phy, right = TRUE) start <- start[o] neworder[newpos] <<- start for (i in 1:Nclade) - if (desc[i] > nb.tip) foo(desc[i], end[i], newpos[i] + 1) + if (desc[i] > nb.tip) foo(desc[i], end[i], newpos[i] + 1) } nb.tip <- length(phy$tip.label) nb.node <- phy$Nnode @@ -37,6 +37,6 @@ ladderize <- function(phy, right = TRUE) foo(nb.tip + 1, nb.edge, 1) phy$edge <- phy$edge[neworder, ] if (!is.null(phy$edge.length)) - phy$edge.length <- phy$edge.length[neworder] + phy$edge.length <- phy$edge.length[neworder] phy }