X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=NAMESPACE;fp=NAMESPACE;h=18ed656695aad2e6021e9dea95ced3255d94fc9e;hb=f3426364b40c7c0e6aadf6ea2690716425abdfc9;hp=0000000000000000000000000000000000000000;hpb=3f528bd2c47301b64ed03bd28039bbf22a7510ad;p=ape.git diff --git a/NAMESPACE b/NAMESPACE new file mode 100644 index 0000000..18ed656 --- /dev/null +++ b/NAMESPACE @@ -0,0 +1,23 @@ +useDynLib(ape) + +export(as.DNAbin, as.phylo, base.freq, dist.dna, dist.nodes, drop.tip, ltt.plot, nj, rcoal, rtree, rmtree, read.dna, read.nexus, read.tree, vcv.phylo, write.dna, write.nexus, write.tree) + +import(gee, nlme) +importFrom(lattice, xyplot, panel.lines, panel.points) + +S3method(print, phylo) +S3method(plot, phylo) +S3method(as.hclust, phylo) +S3method(reorder, phylo) +S3method(print, multiPhylo) +S3method(plot, multiPhylo) +S3method("[", multiPhylo) +S3method("[[", multiPhylo) +S3method("$", multiPhylo) +S3method(unique, multiPhylo) +S3method(print, DNAbin) +S3method(cbind, DNAbin) +S3method(rbind, DNAbin) +S3method("[", DNAbin) +S3method(summary, DNAbin) +S3method(as.character, DNAbin)