X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=Mothur.xcodeproj%2Fproject.pbxproj;h=f27f7c36d9ed36eb9faf93a7f84597c1d88939f4;hb=e3e0858c684c4608d679840024e5095ddc8e2719;hp=4a328a3bca837ad2b90ef16b0722aa5bdad21d30;hpb=5604227332777694ac486dfbdf278b97e205c2ff;p=mothur.git

diff --git a/Mothur.xcodeproj/project.pbxproj b/Mothur.xcodeproj/project.pbxproj
index 4a328a3..f27f7c3 100644
--- a/Mothur.xcodeproj/project.pbxproj
+++ b/Mothur.xcodeproj/project.pbxproj
@@ -45,6 +45,8 @@
 		A72B3A7C118B4D1B004B9F8D /* phylodiversity.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = phylodiversity.cpp; sourceTree = "<group>"; };
 		A72C66A1125B356F0058C2F9 /* pipelinepdscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = pipelinepdscommand.h; sourceTree = "<group>"; };
 		A72C66A2125B356F0058C2F9 /* pipelinepdscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = pipelinepdscommand.cpp; sourceTree = "<group>"; };
+		A72E295D127ADCE300905B79 /* clusterclassic.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = clusterclassic.h; sourceTree = "<group>"; };
+		A72E295E127ADCE300905B79 /* clusterclassic.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = clusterclassic.cpp; sourceTree = "<group>"; };
 		A732505E11E49EF100484B90 /* sffinfocommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sffinfocommand.h; sourceTree = "<group>"; };
 		A732505F11E49EF100484B90 /* sffinfocommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sffinfocommand.cpp; sourceTree = "<group>"; };
 		A73953DA11987ED100B0B160 /* chopseqscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = chopseqscommand.h; sourceTree = "<group>"; };
@@ -55,7 +57,15 @@
 		A747E81D116365E000FB9042 /* chimeraslayercommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = chimeraslayercommand.cpp; sourceTree = "<group>"; };
 		A74A9C03124B72DB000D5D25 /* clusterfragmentscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = clusterfragmentscommand.h; sourceTree = "<group>"; };
 		A74A9C04124B72DB000D5D25 /* clusterfragmentscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = clusterfragmentscommand.cpp; sourceTree = "<group>"; };
+		A751032A128AC93F00ABB831 /* removegroupscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = removegroupscommand.h; sourceTree = "<group>"; };
+		A751032B128AC93F00ABB831 /* removegroupscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = removegroupscommand.cpp; sourceTree = "<group>"; };
+		A75103D6128AE34100ABB831 /* getgroupscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = getgroupscommand.h; sourceTree = "<group>"; };
+		A75103D7128AE34100ABB831 /* getgroupscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = getgroupscommand.cpp; sourceTree = "<group>"; };
 		A7639F8D1175DF35008F5578 /* makefile */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.make; path = makefile; sourceTree = "<group>"; };
+		A7653CB112789EFD009D6C09 /* subsamplecommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = subsamplecommand.h; sourceTree = "<group>"; };
+		A7653CB212789EFD009D6C09 /* subsamplecommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = subsamplecommand.cpp; sourceTree = "<group>"; };
+		A7653D111278B09C009D6C09 /* clusterdoturcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = clusterdoturcommand.h; sourceTree = "<group>"; };
+		A7653D121278B09C009D6C09 /* clusterdoturcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = clusterdoturcommand.cpp; sourceTree = "<group>"; };
 		A76714DD126DE45A003F359A /* deuniqueseqscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = deuniqueseqscommand.h; sourceTree = "<group>"; };
 		A76714DE126DE45A003F359A /* deuniqueseqscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = deuniqueseqscommand.cpp; sourceTree = "<group>"; };
 		A768D95D1248FEAA008AB1D0 /* mothur */ = {isa = PBXFileReference; lastKnownFileType = "compiled.mach-o.executable"; path = mothur; sourceTree = "<group>"; };
@@ -524,6 +534,8 @@
 				A7DA1FFF113FECD400BF472F /* blastalign.cpp */,
 				A7DA201F113FECD400BF472F /* cluster.cpp */,
 				A7DA2020113FECD400BF472F /* cluster.hpp */,
+				A72E295D127ADCE300905B79 /* clusterclassic.h */,
+				A72E295E127ADCE300905B79 /* clusterclassic.cpp */,
 				A7CB593B11402EF90010EB83 /* calculators */,
 				A7CB594A11402FB40010EB83 /* chimeras */,
 				A7CB594511402F6E0010EB83 /* classifers */,
@@ -762,6 +774,8 @@
 				A7D215C911996C6E00F13F13 /* clearcutcommand.cpp */,
 				A7DA2022113FECD400BF472F /* clustercommand.h */,
 				A7DA2021113FECD400BF472F /* clustercommand.cpp */,
+				A7653D111278B09C009D6C09 /* clusterdoturcommand.h */,
+				A7653D121278B09C009D6C09 /* clusterdoturcommand.cpp */,
 				A74A9C03124B72DB000D5D25 /* clusterfragmentscommand.h */,
 				A74A9C04124B72DB000D5D25 /* clusterfragmentscommand.cpp */,
 				A71D924311AEB42400D00CBC /* clustersplitcommand.h */,
@@ -782,6 +796,8 @@
 				A76714DE126DE45A003F359A /* deuniqueseqscommand.cpp */,
 				A7DA2050113FECD400BF472F /* filterseqscommand.h */,
 				A7DA204F113FECD400BF472F /* filterseqscommand.cpp */,
+				A75103D6128AE34100ABB831 /* getgroupscommand.h */,
+				A75103D7128AE34100ABB831 /* getgroupscommand.cpp */,
 				A7DA205B113FECD400BF472F /* getgroupcommand.h */,
 				A7DA205A113FECD400BF472F /* getgroupcommand.cpp */,
 				A7DA205D113FECD400BF472F /* getlabelcommand.h */,
@@ -862,6 +878,8 @@
 				A7DA20EA113FECD400BF472F /* readotucommand.cpp */,
 				A7DA20F1113FECD400BF472F /* readtreecommand.h */,
 				A7DA20F0113FECD400BF472F /* readtreecommand.cpp */,
+				A751032A128AC93F00ABB831 /* removegroupscommand.h */,
+				A751032B128AC93F00ABB831 /* removegroupscommand.cpp */,
 				A787A28E124CE1470076EB84 /* removelineagecommand.h */,
 				A787A28F124CE1470076EB84 /* removelineagecommand.cpp */,
 				A7DA20F3113FECD400BF472F /* removeseqscommand.h */,
@@ -890,6 +908,8 @@
 				A71D924411AEB42400D00CBC /* splitabundcommand.cpp */,
 				A7F139481247C3CB0033324C /* splitgroupscommand.h */,
 				A7F139491247C3CB0033324C /* splitgroupscommand.cpp */,
+				A7653CB112789EFD009D6C09 /* subsamplecommand.h */,
+				A7653CB212789EFD009D6C09 /* subsamplecommand.cpp */,
 				A7DA2155113FECD400BF472F /* summarycommand.h */,
 				A7DA2154113FECD400BF472F /* summarycommand.cpp */,
 				A7DA2159113FECD400BF472F /* summarysharedcommand.h */,