X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=Mothur.xcodeproj%2Fproject.pbxproj;h=a677e4c9b9e115fd647b60cf45983a0c50b06fbf;hb=134a9c1275862a6b3ea10a2c0f11965c0a535854;hp=e2673fc9331524944d0b8b3553e00c42a1f34766;hpb=2c5386dc0cb6a0e42e8d7256bd6fb18ab66e4480;p=mothur.git diff --git a/Mothur.xcodeproj/project.pbxproj b/Mothur.xcodeproj/project.pbxproj index e2673fc..a677e4c 100644 --- a/Mothur.xcodeproj/project.pbxproj +++ b/Mothur.xcodeproj/project.pbxproj @@ -43,6 +43,8 @@ A72B3A63118B37FD004B9F8D /* phylodiversitycommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = phylodiversitycommand.cpp; sourceTree = ""; }; A72B3A7B118B4D1B004B9F8D /* phylodiversity.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = phylodiversity.h; sourceTree = ""; }; A72B3A7C118B4D1B004B9F8D /* phylodiversity.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = phylodiversity.cpp; sourceTree = ""; }; + A72C66A1125B356F0058C2F9 /* pipelinepdscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = pipelinepdscommand.h; sourceTree = ""; }; + A72C66A2125B356F0058C2F9 /* pipelinepdscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = pipelinepdscommand.cpp; sourceTree = ""; }; A732505E11E49EF100484B90 /* sffinfocommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sffinfocommand.h; sourceTree = ""; }; A732505F11E49EF100484B90 /* sffinfocommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sffinfocommand.cpp; sourceTree = ""; }; A73953DA11987ED100B0B160 /* chopseqscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = chopseqscommand.h; sourceTree = ""; }; @@ -54,11 +56,15 @@ A74A9C03124B72DB000D5D25 /* clusterfragmentscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = clusterfragmentscommand.h; sourceTree = ""; }; A74A9C04124B72DB000D5D25 /* clusterfragmentscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = clusterfragmentscommand.cpp; sourceTree = ""; }; A7639F8D1175DF35008F5578 /* makefile */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.make; path = makefile; sourceTree = ""; }; + A76714DD126DE45A003F359A /* deuniqueseqscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = deuniqueseqscommand.h; sourceTree = ""; }; + A76714DE126DE45A003F359A /* deuniqueseqscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = deuniqueseqscommand.cpp; sourceTree = ""; }; A768D95D1248FEAA008AB1D0 /* mothur */ = {isa = PBXFileReference; lastKnownFileType = "compiled.mach-o.executable"; path = mothur; sourceTree = ""; }; A76AAD02117F322B003D8DA1 /* phylosummary.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = phylosummary.h; sourceTree = ""; }; A76AAD03117F322B003D8DA1 /* phylosummary.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = phylosummary.cpp; sourceTree = ""; }; A76C4A1011876BAF0009460B /* setlogfilecommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = setlogfilecommand.h; sourceTree = SOURCE_ROOT; }; A76C4A1111876BAF0009460B /* setlogfilecommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = setlogfilecommand.cpp; sourceTree = SOURCE_ROOT; }; + A77D787B126F387700F351BD /* pairwiseseqscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = pairwiseseqscommand.h; sourceTree = ""; }; + A77D787C126F387700F351BD /* pairwiseseqscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = pairwiseseqscommand.cpp; sourceTree = ""; }; A780E6CB11E7745D00BB5718 /* endiannessmacros.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = endiannessmacros.h; sourceTree = ""; }; A78254461164D7790002E2DD /* chimerapintailcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = chimerapintailcommand.h; sourceTree = ""; }; A78254471164D7790002E2DD /* chimerapintailcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = chimerapintailcommand.cpp; sourceTree = ""; }; @@ -730,12 +736,12 @@ A7DA1FEE113FECD400BF472F /* aligncommand.cpp */, A7DA1FFE113FECD400BF472F /* binsequencecommand.h */, A7DA1FFD113FECD400BF472F /* binsequencecommand.cpp */, - A7DA2007113FECD400BF472F /* bootstrapsharedcommand.cpp */, A7DA2008113FECD400BF472F /* bootstrapsharedcommand.h */, + A7DA2007113FECD400BF472F /* bootstrapsharedcommand.cpp */, A7D216061199C47F00F13F13 /* catchallcommand.h */, A7D216071199C47F00F13F13 /* catchallcommand.cpp */, - A7DA2017113FECD400BF472F /* chimeraseqscommand.cpp */, A7DA2018113FECD400BF472F /* chimeraseqscommand.h */, + A7DA2017113FECD400BF472F /* chimeraseqscommand.cpp */, A7825502116519F70002E2DD /* chimerabellerophoncommand.h */, A7825503116519F70002E2DD /* chimerabellerophoncommand.cpp */, A747E79B1163442A00FB9042 /* chimeracheckcommand.h */, @@ -754,88 +760,94 @@ A7BBDA7C11B5694E006E6551 /* classifyotucommand.cpp */, A7D215C811996C6E00F13F13 /* clearcutcommand.h */, A7D215C911996C6E00F13F13 /* clearcutcommand.cpp */, - A7DA2021113FECD400BF472F /* clustercommand.cpp */, A7DA2022113FECD400BF472F /* clustercommand.h */, + A7DA2021113FECD400BF472F /* clustercommand.cpp */, A74A9C03124B72DB000D5D25 /* clusterfragmentscommand.h */, A74A9C04124B72DB000D5D25 /* clusterfragmentscommand.cpp */, A71D924311AEB42400D00CBC /* clustersplitcommand.h */, A71D924211AEB42400D00CBC /* clustersplitcommand.cpp */, A7DA2026113FECD400BF472F /* collectcommand.h */, A7DA2025113FECD400BF472F /* collectcommand.cpp */, - A7DA2029113FECD400BF472F /* collectsharedcommand.cpp */, A7DA202A113FECD400BF472F /* collectsharedcommand.h */, - A7DA2031113FECD400BF472F /* consensuscommand.cpp */, + A7DA2029113FECD400BF472F /* collectsharedcommand.cpp */, A7DA2032113FECD400BF472F /* consensuscommand.h */, + A7DA2031113FECD400BF472F /* consensuscommand.cpp */, A7118EE511CFCAC000CFDE03 /* degapseqscommand.h */, A7118EE611CFCAC000CFDE03 /* degapseqscommand.cpp */, - A7DA203A113FECD400BF472F /* deconvolutecommand.cpp */, A7DA203B113FECD400BF472F /* deconvolutecommand.h */, - A7DA203E113FECD400BF472F /* distancecommand.cpp */, + A7DA203A113FECD400BF472F /* deconvolutecommand.cpp */, A7DA203F113FECD400BF472F /* distancecommand.h */, - A7DA204F113FECD400BF472F /* filterseqscommand.cpp */, + A7DA203E113FECD400BF472F /* distancecommand.cpp */, + A76714DD126DE45A003F359A /* deuniqueseqscommand.h */, + A76714DE126DE45A003F359A /* deuniqueseqscommand.cpp */, A7DA2050113FECD400BF472F /* filterseqscommand.h */, - A7DA205A113FECD400BF472F /* getgroupcommand.cpp */, + A7DA204F113FECD400BF472F /* filterseqscommand.cpp */, A7DA205B113FECD400BF472F /* getgroupcommand.h */, - A7DA205C113FECD400BF472F /* getlabelcommand.cpp */, + A7DA205A113FECD400BF472F /* getgroupcommand.cpp */, A7DA205D113FECD400BF472F /* getlabelcommand.h */, + A7DA205C113FECD400BF472F /* getlabelcommand.cpp */, A787A24F124CB46C0076EB84 /* getlineagecommand.h */, A787A250124CB46C0076EB84 /* getlineagecommand.cpp */, A7DA205F113FECD400BF472F /* getlistcountcommand.h */, A7DA205E113FECD400BF472F /* getlistcountcommand.cpp */, A7DA2061113FECD400BF472F /* getoturepcommand.h */, A7DA2060113FECD400BF472F /* getoturepcommand.cpp */, - A7DA2062113FECD400BF472F /* getrabundcommand.cpp */, A7DA2063113FECD400BF472F /* getrabundcommand.h */, + A7DA2062113FECD400BF472F /* getrabundcommand.cpp */, A7118F0F11CFD5DC00CFDE03 /* getrelabundcommand.h */, A7118F1011CFD5DC00CFDE03 /* getrelabundcommand.cpp */, - A7DA2064113FECD400BF472F /* getsabundcommand.cpp */, A7DA2065113FECD400BF472F /* getsabundcommand.h */, + A7DA2064113FECD400BF472F /* getsabundcommand.cpp */, A7DA2067113FECD400BF472F /* getseqscommand.h */, A7DA2066113FECD400BF472F /* getseqscommand.cpp */, - A7DA2068113FECD400BF472F /* getsharedotucommand.cpp */, A7DA2069113FECD400BF472F /* getsharedotucommand.h */, - A7DA2074113FECD400BF472F /* hclustercommand.cpp */, + A7DA2068113FECD400BF472F /* getsharedotucommand.cpp */, A7DA2075113FECD400BF472F /* hclustercommand.h */, - A7DA2078113FECD400BF472F /* heatmapcommand.cpp */, + A7DA2074113FECD400BF472F /* hclustercommand.cpp */, A7DA2079113FECD400BF472F /* heatmapcommand.h */, - A7DA207C113FECD400BF472F /* heatmapsimcommand.cpp */, + A7DA2078113FECD400BF472F /* heatmapcommand.cpp */, A7DA207D113FECD400BF472F /* heatmapsimcommand.h */, - A7DA207E113FECD400BF472F /* helpcommand.cpp */, + A7DA207C113FECD400BF472F /* heatmapsimcommand.cpp */, A7DA207F113FECD400BF472F /* helpcommand.h */, + A7DA207E113FECD400BF472F /* helpcommand.cpp */, A7DA208E113FECD400BF472F /* libshuffcommand.h */, A7DA208D113FECD400BF472F /* libshuffcommand.cpp */, A7DA2090113FECD400BF472F /* listseqscommand.h */, A7DA208F113FECD400BF472F /* listseqscommand.cpp */, A703FE931194645F002C397E /* makegroupcommand.h */, A703FE941194645F002C397E /* makegroupcommand.cpp */, - A7DA2098113FECD400BF472F /* matrixoutputcommand.cpp */, A7DA2099113FECD400BF472F /* matrixoutputcommand.h */, - A7DA209A113FECD400BF472F /* mergefilecommand.cpp */, + A7DA2098113FECD400BF472F /* matrixoutputcommand.cpp */, A7DA209B113FECD400BF472F /* mergefilecommand.h */, + A7DA209A113FECD400BF472F /* mergefilecommand.cpp */, A7F6C8EA12423C0300299875 /* metastatscommand.h */, A7F6C8EB12423C0300299875 /* metastatscommand.cpp */, - A7DA209C113FECD400BF472F /* mgclustercommand.cpp */, A7DA209D113FECD400BF472F /* mgclustercommand.h */, - A7DA20AC113FECD400BF472F /* nocommands.cpp */, + A7DA209C113FECD400BF472F /* mgclustercommand.cpp */, A7DA20AD113FECD400BF472F /* nocommands.h */, + A7DA20AC113FECD400BF472F /* nocommands.cpp */, A798626D1240D91B005FC847 /* normalizesharedcommand.h */, A798626E1240D91B005FC847 /* normalizesharedcommand.cpp */, - A7DA20B8113FECD400BF472F /* otuhierarchycommand.cpp */, A7DA20B9113FECD400BF472F /* otuhierarchycommand.h */, + A7DA20B8113FECD400BF472F /* otuhierarchycommand.cpp */, + A77D787B126F387700F351BD /* pairwiseseqscommand.h */, + A77D787C126F387700F351BD /* pairwiseseqscommand.cpp */, A724C2B61254961E006BB1C7 /* parsefastaqcommand.h */, A724C2B71254961E006BB1C7 /* parsefastaqcommand.cpp */, - A7DA20BC113FECD400BF472F /* parselistscommand.cpp */, A7DA20BD113FECD400BF472F /* parselistscommand.h */, + A7DA20BC113FECD400BF472F /* parselistscommand.cpp */, A7E8338C115BBDAA00739EC4 /* parsesffcommand.h */, A7E8338B115BBDAA00739EC4 /* parsesffcommand.cpp */, - A7DA20C0113FECD400BF472F /* parsimonycommand.cpp */, A7DA20C1113FECD400BF472F /* parsimonycommand.h */, + A7DA20C0113FECD400BF472F /* parsimonycommand.cpp */, A7DA20C3113FECD400BF472F /* pcacommand.h */, A7DA20C2113FECD400BF472F /* pcacommand.cpp */, A72B3A62118B37FD004B9F8D /* phylodiversitycommand.h */, A72B3A63118B37FD004B9F8D /* phylodiversitycommand.cpp */, A7DA20C7113FECD400BF472F /* phylotypecommand.h */, A7DA20C6113FECD400BF472F /* phylotypecommand.cpp */, + A72C66A1125B356F0058C2F9 /* pipelinepdscommand.h */, + A72C66A2125B356F0058C2F9 /* pipelinepdscommand.cpp */, A7DA20CB113FECD400BF472F /* preclustercommand.h */, A7DA20CA113FECD400BF472F /* preclustercommand.cpp */, A7DA20D1113FECD400BF472F /* quitcommand.h */, @@ -1101,6 +1113,12 @@ buildConfigurationList = 1DEB919308733D9F0010E9CD /* Build configuration list for PBXProject "Mothur" */; compatibilityVersion = "Xcode 3.0"; hasScannedForEncodings = 1; + knownRegions = ( + English, + Japanese, + French, + German, + ); mainGroup = 08FB7794FE84155DC02AAC07 /* mothur */; projectDirPath = ""; projectRoot = "";