X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=Mothur.xcodeproj%2Fproject.pbxproj;h=6770cecbd4a72f81f5f1a3a69910ab3b0b97d266;hb=bc4c4d63e983a3e91e74b5038bfec6705e1a3a2e;hp=ab546df5272e5ed9044d1fb1d8bc053748579e9a;hpb=0d714b1c40488d4c2f3a61a5ef861f21522d48b4;p=mothur.git

diff --git a/Mothur.xcodeproj/project.pbxproj b/Mothur.xcodeproj/project.pbxproj
index ab546df..6770cec 100644
--- a/Mothur.xcodeproj/project.pbxproj
+++ b/Mothur.xcodeproj/project.pbxproj
@@ -7,8 +7,15 @@
 	objects = {
 
 /* Begin PBXFileReference section */
+		7EA299BA11E384940022D8D3 /* sensspeccommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sensspeccommand.h; sourceTree = "<group>"; };
+		7EA299BB11E384940022D8D3 /* sensspeccommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sensspeccommand.cpp; sourceTree = "<group>"; };
+		7EC61A0911BEA6AF00F668D9 /* weightedlinkage.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = weightedlinkage.cpp; sourceTree = "<group>"; };
 		A703FE931194645F002C397E /* makegroupcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = makegroupcommand.h; sourceTree = SOURCE_ROOT; };
 		A703FE941194645F002C397E /* makegroupcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = makegroupcommand.cpp; sourceTree = SOURCE_ROOT; };
+		A7118EE511CFCAC000CFDE03 /* degapseqscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = degapseqscommand.h; sourceTree = "<group>"; };
+		A7118EE611CFCAC000CFDE03 /* degapseqscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = degapseqscommand.cpp; sourceTree = "<group>"; };
+		A7118F0F11CFD5DC00CFDE03 /* getrelabundcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = getrelabundcommand.h; sourceTree = "<group>"; };
+		A7118F1011CFD5DC00CFDE03 /* getrelabundcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = getrelabundcommand.cpp; sourceTree = "<group>"; };
 		A71D924211AEB42400D00CBC /* clustersplitcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = clustersplitcommand.cpp; sourceTree = "<group>"; };
 		A71D924311AEB42400D00CBC /* clustersplitcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = clustersplitcommand.h; sourceTree = "<group>"; };
 		A71D924411AEB42400D00CBC /* splitabundcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = splitabundcommand.cpp; sourceTree = "<group>"; };
@@ -640,6 +647,7 @@
 				A7DA2170113FECD400BF472F /* uvest.h */,
 				A7DA2179113FECD400BF472F /* weighted.cpp */,
 				A7DA217A113FECD400BF472F /* weighted.h */,
+				7EC61A0911BEA6AF00F668D9 /* weightedlinkage.cpp */,
 				A7DA217B113FECD400BF472F /* whittaker.cpp */,
 				A7DA217C113FECD400BF472F /* whittaker.h */,
 			);
@@ -649,6 +657,8 @@
 		A7CB593E11402F110010EB83 /* commands */ = {
 			isa = PBXGroup;
 			children = (
+				7EA299BA11E384940022D8D3 /* sensspeccommand.h */,
+				7EA299BB11E384940022D8D3 /* sensspeccommand.cpp */,
 				A7DA202B113FECD400BF472F /* command.hpp */,
 				A7DA1FEF113FECD400BF472F /* aligncommand.h */,
 				A7DA1FEE113FECD400BF472F /* aligncommand.cpp */,
@@ -659,12 +669,12 @@
 				A7D216061199C47F00F13F13 /* catchallcommand.h */,
 				A7D216071199C47F00F13F13 /* catchallcommand.cpp */,
 				A7DA2017113FECD400BF472F /* chimeraseqscommand.cpp */,
-				A78434881162224F00100BE0 /* chimeraccodecommand.h */,
 				A7DA2018113FECD400BF472F /* chimeraseqscommand.h */,
 				A7825502116519F70002E2DD /* chimerabellerophoncommand.h */,
 				A7825503116519F70002E2DD /* chimerabellerophoncommand.cpp */,
 				A747E79B1163442A00FB9042 /* chimeracheckcommand.h */,
 				A747E79C1163442A00FB9042 /* chimeracheckcommand.cpp */,
+				A78434881162224F00100BE0 /* chimeraccodecommand.h */,
 				A78434891162224F00100BE0 /* chimeraccodecommand.cpp */,
 				A78254461164D7790002E2DD /* chimerapintailcommand.h */,
 				A78254471164D7790002E2DD /* chimerapintailcommand.cpp */,
@@ -688,6 +698,8 @@
 				A7DA202A113FECD400BF472F /* collectsharedcommand.h */,
 				A7DA2031113FECD400BF472F /* consensuscommand.cpp */,
 				A7DA2032113FECD400BF472F /* consensuscommand.h */,
+				A7118EE511CFCAC000CFDE03 /* degapseqscommand.h */,
+				A7118EE611CFCAC000CFDE03 /* degapseqscommand.cpp */,
 				A7DA203A113FECD400BF472F /* deconvolutecommand.cpp */,
 				A7DA203B113FECD400BF472F /* deconvolutecommand.h */,
 				A7DA203E113FECD400BF472F /* distancecommand.cpp */,
@@ -704,6 +716,8 @@
 				A7DA2060113FECD400BF472F /* getoturepcommand.cpp */,
 				A7DA2062113FECD400BF472F /* getrabundcommand.cpp */,
 				A7DA2063113FECD400BF472F /* getrabundcommand.h */,
+				A7118F0F11CFD5DC00CFDE03 /* getrelabundcommand.h */,
+				A7118F1011CFD5DC00CFDE03 /* getrelabundcommand.cpp */,
 				A7DA2064113FECD400BF472F /* getsabundcommand.cpp */,
 				A7DA2065113FECD400BF472F /* getsabundcommand.h */,
 				A7DA2067113FECD400BF472F /* getseqscommand.h */,
@@ -958,6 +972,7 @@
 			isa = PBXProject;
 			attributes = {
 				BuildIndependentTargetsInParallel = YES;
+				ORGANIZATIONNAME = "Schloss Lab";
 			};
 			buildConfigurationList = 1DEB919308733D9F0010E9CD /* Build configuration list for PBXProject "Mothur" */;
 			compatibilityVersion = "Xcode 3.0";