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37D927F90F21331F001D4494 /* parselistcommand.cpp */, 3792946E0F2E191800B9034A /* parsimonycommand.h */, @@ -492,8 +549,6 @@ 372E12950F263D5A0095CF7E /* readdistcommand.cpp */, 372E126E0F26365B0095CF7E /* readotucommand.h */, 372E126F0F26365B0095CF7E /* readotucommand.cpp */, - 37AFC7A10F44703E005F492D /* readsharedcommand.h */, - 37AFC7A20F44703E005F492D /* readsharedcommand.cpp */, 37E5F4900F2A3DA800F8D827 /* readtreecommand.h */, 37E5F4910F2A3DA800F8D827 /* readtreecommand.cpp */, 37D928270F21331F001D4494 /* sharedcommand.h */, @@ -516,6 +571,8 @@ 37D927D50F21331F001D4494 /* datavector.hpp */, 37D927DC0F21331F001D4494 /* fastamap.h */, 37D927DB0F21331F001D4494 /* fastamap.cpp */, + 3782163B0F616079008E1F6D /* fullmatrix.h */, + 3782163C0F616079008E1F6D /* fullmatrix.cpp */, 37D927E20F21331F001D4494 /* groupmap.h */, 37D927E10F21331F001D4494 /* groupmap.cpp */, 37D927EE0F21331F001D4494 /* listvector.hpp */, @@ -534,6 +591,8 @@ 37D928300F21331F001D4494 /* sharedrabundvector.cpp */, 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37AFC7A30F44703E005F492D /* readsharedcommand.cpp in Sources */, A70B53AA0F4CD7AD0064797E /* getgroupcommand.cpp in Sources */, A70B53AB0F4CD7AD0064797E /* getlabelcommand.cpp in Sources */, A70B53AC0F4CD7AD0064797E /* getlinecommand.cpp in Sources */, + 3782163D0F616079008E1F6D /* fullmatrix.cpp in Sources */, + 374CD63F0F65832000D90B4A /* libshuffcommand.cpp in Sources */, + 374CD6F10F65A4C100D90B4A /* coverage.cpp in Sources */, + 3765B47A0F77D15900C3EDC5 /* nocommands.cpp in Sources */, + 3765B4E20F78055000C3EDC5 /* sharedochiai.cpp in Sources */, + 3765B5160F780A7F00C3EDC5 /* sharedanderberg.cpp in Sources */, + 217595330F791EEE001CC3C6 /* sharedkulczynski.cpp in Sources */, + 2175953F0F792111001CC3C6 /* sharedkulczynskicody.cpp in Sources */, + 217595590F792490001CC3C6 /* sharedlennon.cpp in Sources */, + 217595640F7927BB001CC3C6 /* sharedmorisitahorn.cpp in Sources */, + 217595710F792A33001CC3C6 /* sharedbraycurtis.cpp in Sources */, + 3765B5380F7A5A9E00C3EDC5 /* heatmapcommand.cpp in Sources */, + 3765B5460F7A62A000C3EDC5 /* heatmap.cpp in Sources */, ); runOnlyForDeploymentPostprocessing = 0; };