X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=Makefile;fp=Makefile;h=b87aa21f22911187f642ab3af9f2eba75ce82c78;hb=8f5f94cc8b0e750124693ffe3490175b9a049ff0;hp=cb3d0351a80415120c5430118aba313fb4c0c059;hpb=444329df857cf09539db00a80e0a6a475ba338e2;p=imprinted_genes.git

diff --git a/Makefile b/Makefile
index cb3d035..b87aa21 100644
--- a/Makefile
+++ b/Makefile
@@ -1,5 +1,8 @@
 #!/usr/bin/make -f
 
+R=R
+ROPTS=-q --no-save --no-restore-data
+
 geneimprint_human.html:
 	wget -O $@ "http://www.geneimprint.com/site/genes-by-species.Homo+sapiens"
 
@@ -12,3 +15,6 @@ geneimprint_human.txt: geneimprint_human.html parse_geneimprint.pl
 
 parent_of_origin.txt: parent_of_origin.html parse_parent_of_origin.pl
 	./parse_parent_of_origin.pl $< > $@
+
+combined_imprinted_genes.txt: combine_imprinted_genes.R geneimprint_human.txt parent_of_origin.txt
+	$(R) $(ROPTS) -f $< --args $(wordlist 2,$(words $^),$^) $@