X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;ds=sidebyside;f=venncommand.cpp;fp=venncommand.cpp;h=5a5b9b3481e6e784ed5ef7c920bff78814300431;hb=55386dddad84cc1140d736cabaf4dd0ae16f2e01;hp=7ee0489d8780341587f684aaac1555c97560152b;hpb=990ded2eb38078a417fa00b4fbb4d3c24f4b5046;p=mothur.git

diff --git a/venncommand.cpp b/venncommand.cpp
index 7ee0489..5a5b9b3 100644
--- a/venncommand.cpp
+++ b/venncommand.cpp
@@ -168,7 +168,7 @@ VennCommand::VennCommand(string option)  {
 			if (groups == "not found") { groups = ""; }
 			else { 
 				m->splitAtDash(groups, Groups);
-				m->Groups = Groups;
+				m->setGroups(Groups);
 			}
 			
 			calc = validParameter.validFile(parameters, "calc", false);			
@@ -274,7 +274,7 @@ int VennCommand::execute(){
 				if (m->control_pressed) {
 					for (int i = 0; i < vennCalculators.size(); i++) {	delete vennCalculators[i];	}
 					for (int i = 0; i < lookup.size(); i++) {  delete lookup[i];  } 
-					m->Groups.clear(); delete venn; delete input;
+					m->clearGroups(); delete venn; delete input;
 					for (int i = 0; i < outputNames.size(); i++) {	m->mothurRemove(outputNames[i]);  }
 					return 0;
 				}
@@ -357,7 +357,7 @@ int VennCommand::execute(){
 			
 			if (m->control_pressed) {
 					for (int i = 0; i < vennCalculators.size(); i++) {	delete vennCalculators[i];	}
-					m->Groups.clear(); delete venn; delete input; 
+					m->clearGroups(); delete venn; delete input; 
 					for (int i = 0; i < outputNames.size(); i++) {	m->mothurRemove(outputNames[i]);  }
 					return 0;
 			}
@@ -414,10 +414,10 @@ int VennCommand::execute(){
 		
 
 			//reset groups parameter
-			m->Groups.clear();  
+			m->clearGroups();  
 			
 			if (m->control_pressed) {
-					m->Groups.clear(); delete venn; delete input;
+					m->clearGroups(); delete venn; delete input;
 					for (int i = 0; i < vennCalculators.size(); i++) {	delete vennCalculators[i];	}
 					for (int i = 0; i < outputNames.size(); i++) {	m->mothurRemove(outputNames[i]);  }
 					return 0;