X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;ds=sidebyside;f=shhhercommand.cpp;h=ffddb8cfc9de4dd92feb4966dd8d31477e1363fa;hb=a3ab9317d12127ff88b039c9933e98eeb562eaa0;hp=63df681923c0a91e87c3507f861fcd519253f332;hpb=259b6adf51ef0639cafd88cf862e4ffd5e0c7576;p=mothur.git

diff --git a/shhhercommand.cpp b/shhhercommand.cpp
index 63df681..ffddb8c 100644
--- a/shhhercommand.cpp
+++ b/shhhercommand.cpp
@@ -838,7 +838,7 @@ void ShhherCommand::getJointLookUp(){
 		for(int i=0;i<NUMBINS;i++){
 			for(int j=0;j<NUMBINS;j++){		
 				
-				double minSum = 10000000000;
+				double minSum = 100000000;
 				
 				for(int k=0;k<HOMOPS;k++){
 					double sum = singleLookUp[k * NUMBINS + i] + singleLookUp[k * NUMBINS + j];
@@ -857,9 +857,11 @@ void ShhherCommand::getJointLookUp(){
 
 /**************************************************************************************************/
 
-float ShhherCommand::getProbIntensity(int intIntensity){                          
+double ShhherCommand::getProbIntensity(int intIntensity){                          
 	try{
-		double minNegLogProb = 10000000000; 
+
+		double minNegLogProb = 100000000; 
+
 		
 		for(int i=0;i<HOMOPS;i++){//loop signal strength
 			float negLogProb = singleLookUp[i * NUMBINS + intIntensity];