X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;ds=sidebyside;f=readdistcommand.h;h=981afa339308199105a0082c8458dd0b1ed7295c;hb=599af78a6ea4916919d460a131e2d0dffa28d35e;hp=4f38d034f1f14e320da5495ac79a04d4deff16b3;hpb=58cf1d08fee8c64334979075fa57bcafb035a2ed;p=mothur.git

diff --git a/readdistcommand.h b/readdistcommand.h
index 4f38d03..981afa3 100644
--- a/readdistcommand.h
+++ b/readdistcommand.h
@@ -9,10 +9,10 @@
  *
  */
 
-#include <iostream>
-#include <fstream>
 #include "command.hpp"
 #include "readmatrix.hpp"
+#include "fullmatrix.h"
+#include "groupmap.h"
 
 /* The read.dist command is used to read a distance matrix file.  
 The read.dist command parameter options are phylipfile, columnfile, namefile, cutoff and precision. 
@@ -35,6 +35,8 @@ private:
 	double cutoff;
 	int precision;
 	ReadMatrix* read;
+	FullMatrix* matrix;
+	GroupMap* groupMap;
 	string filename, format, method;
 	NameAssignment* nameMap;
 };