X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;ds=sidebyside;f=listvector.hpp;fp=listvector.hpp;h=0000000000000000000000000000000000000000;hb=4a877efa127e56e81a21f53cfdbbfd3bfbe8c4ff;hp=dcf01a0ad4b356f152a3cf8ca168a6ba528b63bb;hpb=a6cf29fa4dac0909c7582cb1094151d34093ee76;p=mothur.git

diff --git a/listvector.hpp b/listvector.hpp
deleted file mode 100644
index dcf01a0..0000000
--- a/listvector.hpp
+++ /dev/null
@@ -1,51 +0,0 @@
-#ifndef LIST_H
-#define LIST_H
-
-#include "datavector.hpp"
-
-/*	DataStructure for a list file.
-	This class is a child to datavector.  It represents OTU information at a certain distance. 
-	A list vector can be converted into and ordervector, rabundvector or sabundvector.
-	Each member of the internal container "data" represents an individual OTU.
-	So data[0] = "a,b,c,d,e,f".
-	example: listvector		=	a,b,c,d,e,f		g,h,i		j,k		l		m  
-			 rabundvector	=	6				3			2		1		1
-			 sabundvector	=	2		1		1		0		0		1
-			 ordervector	=	1	1	1	1	1	1	2	2	2	3	3	4	5 */
-
-class ListVector : public DataVector {
-	
-public:
-	ListVector();
-	ListVector(int);
-//	ListVector(const ListVector&);
-	ListVector(string, vector<string>);
-	ListVector(const ListVector& lv) : DataVector(lv.label), data(lv.data), maxRank(lv.maxRank), numBins(lv.numBins), numSeqs(lv.numSeqs){};
-	ListVector(ifstream&);
-	~ListVector(){};
-	
-	int getNumBins()							{	return numBins;		}
-	int getNumSeqs()							{	return numSeqs;		}
-	int getMaxRank()							{	return maxRank;		}
-
-	void set(int, string);	
-	string get(int);
-	void push_back(string);
-	void resize(int);
-	void clear();
-	int size();
-	void print(ostream&);
-	
-	RAbundVector getRAbundVector();
-	SAbundVector getSAbundVector();
-	OrderVector getOrderVector(map<string,int>*);
-	
-private:
-	vector<string> data;  //data[i] is a list of names of sequences in the ith OTU.
-	int maxRank;
-	int numBins;
-	int numSeqs;
-
-};
-
-#endif