X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;ds=sidebyside;f=commandfactory.hpp;fp=commandfactory.hpp;h=0000000000000000000000000000000000000000;hb=4a877efa127e56e81a21f53cfdbbfd3bfbe8c4ff;hp=e95db8016a4149c9c2defdbb9e7933ff6ee3905a;hpb=a6cf29fa4dac0909c7582cb1094151d34093ee76;p=mothur.git

diff --git a/commandfactory.hpp b/commandfactory.hpp
deleted file mode 100644
index e95db80..0000000
--- a/commandfactory.hpp
+++ /dev/null
@@ -1,61 +0,0 @@
-#ifndef COMMANDFACTORY_HPP
-#define COMMANDFACTORY_HPP
-
-/*
- *  commandfactory.h
- *  
- *
- *  Created by Pat Schloss on 10/25/08.
- *  Copyright 2008 Patrick D. Schloss. All rights reserved.
- *
- */
-
-#include "mothur.h"
-#include "mothurout.h"
-#include "currentfile.h"
-
-class Command;
-
-class CommandFactory {
-public:
-	static CommandFactory* getInstance();
-	Command* getCommand(string, string, string);
-	Command* getCommand(string, string);
-	Command* getCommand(string);
-	//Command* getCommand();
-	bool isValidCommand(string);
-	bool isValidCommand(string, string);
-	void printCommands(ostream&);
-	void setOutputDirectory(string o)		{	outputDir = o;	m->setOutputDir(o);	}
-	void setInputDirectory(string i)		{	inputDir = i;		}
-	void setLogfileName(string n, bool a)	{	logFileName = n;  append = a;		}
-	string getLogfileName()					{	return logFileName; 	}
-	bool getAppend()						{	return append;			}
-	string getOutputDir()					{	return outputDir;		}
-	bool MPIEnabled(string);
-	map<string, string> getListCommands()	{	return commands;		}
-	
-private:
-	Command* command;
-	Command* shellcommand;
-	Command* pipecommand;
-	
-	MothurOut* m;
-	CurrentFile* currentFile;
-	
-	map<string, string> commands;
-	map<string, string>::iterator it;
-	string outputDir, inputDir, logFileName;
-	bool append;
-	
-    int checkForRedirects(string);
-    
-	static CommandFactory* _uniqueInstance;
-	CommandFactory( const CommandFactory& ); // Disable copy constructor
-	void operator=( const CommandFactory& ); // Disable assignment operator
-	CommandFactory();
-	~CommandFactory();
-
-};
-
-#endif