X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;ds=sidebyside;f=bp_bin%2Fcount_vals;h=8081e5c98e661cddd658cb760af0bc3b3548e70f;hb=0eaab8705c6261ef41411e8e4b146e9d407e588e;hp=3beaeedcc3262f8a39537b3341324441a0d4539a;hpb=e0b1c18d1409ea7059d3efd22229d1334aeef6c6;p=biopieces.git

diff --git a/bp_bin/count_vals b/bp_bin/count_vals
index 3beaeed..8081e5c 100755
--- a/bp_bin/count_vals
+++ b/bp_bin/count_vals
@@ -1,4 +1,4 @@
-#!/usr/bin/env perl -w
+#!/usr/bin/env perl
 
 # Copyright (C) 2007-2009 Martin A. Hansen.
 
@@ -26,6 +26,7 @@
 # >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
 
 
+use warnings;
 use strict;
 use Maasha::Filesys;
 use Maasha::Biopieces;
@@ -34,7 +35,7 @@ use Maasha::Biopieces;
 # >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
 
 
-my ( $run_time_beg, $run_time_end, $options, $in, $out, $num, $record, %count_hash, @records, $tmp_dir, $tmp_file, $fh_out, $fh_in, $cache );
+my ( $options, $in, $out, $num, $record, %count_hash, @records, $tmp_dir, $tmp_file, $fh_out, $fh_in, $cache );
 
 $options = Maasha::Biopieces::parse_options(
     [
@@ -105,7 +106,8 @@ foreach $record ( @records )
 
 unlink $tmp_file;
 
-Maasha::Filesys::dir_remove( $tmp_dir );
+Maasha::Biopieces::close_stream( $in );
+Maasha::Biopieces::close_stream( $out );
 
 
 # >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
@@ -113,19 +115,13 @@ Maasha::Filesys::dir_remove( $tmp_dir );
 
 BEGIN
 {
-    $run_time_beg = Maasha::Biopieces::run_time();
-
-    Maasha::Biopieces::log_biopiece();
+    Maasha::Biopieces::status_set();
 }
 
+
 END
 {
-    Maasha::Biopieces::close_stream( $in );
-    Maasha::Biopieces::close_stream( $out );
-
-    $run_time_end = Maasha::Biopieces::run_time();
-
-    Maasha::Biopieces::run_time_print( $run_time_beg, $run_time_end, $options );
+    Maasha::Biopieces::status_log();
 }