X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;ds=sidebyside;f=bp_bin%2FBGB_delete_track;h=390b5f4933c569676c8816446a2b35cecdfd08a9;hb=48bea5c28b89dc5586d0bddb338ccd6ba23aa1f9;hp=c2595522765ac9b2272763d5d5fbae71c4b48247;hpb=ff7b7bc6c83c8f095dc20d27a459d9ff5b5446c2;p=biopieces.git diff --git a/bp_bin/BGB_delete_track b/bp_bin/BGB_delete_track index c259552..390b5f4 100755 --- a/bp_bin/BGB_delete_track +++ b/bp_bin/BGB_delete_track @@ -32,7 +32,7 @@ use Data::Dumper; use Maasha::Common; use Maasha::Filesys; use Maasha::Biopieces; -use Maasha::BGB::Common; +use Maasha::BGB::Track; # >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< @@ -60,13 +60,13 @@ while ( $record = Maasha::Biopieces::get_record( $in ) ) Maasha::Biopieces::put_record( $record, $out ); } -Maasha::Common::error( qq(Bad user: "$options->{ 'user' }") ) if not grep /^$options->{ 'user' }$/, Maasha::BGB::Common::list_users(); +Maasha::Common::error( qq(Bad user: "$options->{ 'user' }") ) if not grep /^$options->{ 'user' }$/, Maasha::BGB::Track::list_users(); -@contigs = Maasha::BGB::Common::list_contigs( $options->{ 'user' }, $options->{ 'clade' }, $options->{ 'genome' }, $options->{ 'assembly' } ); +@contigs = Maasha::BGB::Track::list_contigs( $options->{ 'user' }, $options->{ 'clade' }, $options->{ 'genome' }, $options->{ 'assembly' } ); foreach $contig ( @contigs ) { - @tracks = Maasha::BGB::Common::list_track_dir( $options->{ 'user' }, $options->{ 'clade' }, $options->{ 'genome' }, $options->{ 'assembly' }, $contig ); + @tracks = Maasha::BGB::Track::list_track_dir( $options->{ 'user' }, $options->{ 'clade' }, $options->{ 'genome' }, $options->{ 'assembly' }, $contig ); foreach $track ( @tracks ) {