X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;ds=sidebyside;f=README.md;h=f8c4e2709436f97e446ac3dbbda2306818df70f4;hb=53e8bbb15e0bfed6a0caae7b5ba6777a9a942266;hp=2bb60152c0492f6b8260169a72edfe877b5938c0;hpb=3ec78aa9af79921c44d62b65f88865a4b65880be;p=rsem.git

diff --git a/README.md b/README.md
index 2bb6015..f8c4e27 100644
--- a/README.md
+++ b/README.md
@@ -148,7 +148,8 @@ The plots generated depends on read type and user configuration. It
 may include fragment length distribution, mate length distribution,
 read start position distribution (RSPD), quality score vs observed
 quality given a reference base, position vs percentage of sequencing
-error given a reference base and histogram of read alignments.
+error given a reference base and histogram of reads with different
+number of alignments.
 
 fragment length distribution and mate length distribution: x-axis is fragment/mate length, y axis is the probability of generating a fragment/mate with the associated length
 
@@ -158,7 +159,7 @@ Quality score vs. observed quality given a reference base: x-axis is Phred quali
 
 Position vs. percentage sequencing error given a reference base: x-axis is position and y-axis is percentage sequencing error
 
-Histogram of read alignments: x-axis is the number of alignments a read has and y-axis is the number of such reads
+Histogram of reads with different number of alignments: x-axis is the number of alignments a read has and y-axis is the number of such reads. The inf in x-axis means number of reads filtered due to too many alignments
  
 ## <a name="example"></a> Example