/***********************************************************************/
//This is used by SharedJAbund and SharedSorAbund
-EstOutput UVEst::getUVest(SharedRAbundVector* shared1, SharedRAbundVector* shared2) {
+EstOutput UVEst::getUVest(vector<SharedRAbundVector*> shared) {
try {
EstOutput results;
results.resize(2,0);
sumSharedA1 = the sum of all shared otus in A where B = 1
sumSharedB1 = the sum of all shared otus in B where A = 1 */
- for (int i = 0; i < shared1->size(); i++) {
+ for (int i = 0; i < shared[0]->size(); i++) {
//store in temps to avoid multiple repetitive function calls
- tempA = shared1->getAbundance(i);
- tempB = shared2->getAbundance(i);
+ tempA = shared[0]->getAbundance(i);
+ tempB = shared[1]->getAbundance(i);
Atotal += tempA;
Btotal += tempB;