map<string,int> seqsPerGroup; //groupname, number of seqs in that group.
map<string, GroupIndex> treemap; //sequence name and <groupname, vector index>
void print(ostream&);
- void makeSim(GroupMap*); //takes groupmap info and fills treemap for use by tree.shared command.
+ void makeSim(vector<string>); //takes groupmap info and fills treemap for use by tree.shared command.
void makeSim(ListVector*); //takes listvector info and fills treemap for use by tree.shared command.
private: