*
*/
-#include <map>
-#include <string>
-#include <iostream>
-#include <fstream>
+#include "mothur.h"
#include "utilities.hpp"
/* This class is used by the read.tree command to build the tree container. */
map<string, GroupIndex> treemap; //sequence name and <groupname, vector index>
void print(ostream&);
+
private:
ifstream fileHandle;
string groupFileName;
map<string, int>::iterator it2;
void setNamesOfGroups(string);
+
};
#endif