Scientific software usage in neuroscience research
==================================================
+**Survey for 2011 is already closed and no new submissions accepted.**
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answer as many questions as you can, but don't worry if you cannot answer all
-of them. For feedback email team@neuro.debian.net
+of them. *You need to have javascript enabled in your browser for this survey.*
+For feedback email team@neuro.debian.net
.. raw:: html
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- $('#server_response').html("<p><em>Thanks for participating in this survey.</em></p>" + data.results)
+ $('#server_response').html("<p><em>Thanks for participating in this survey. Scroll down to see the statistics.</em></p>" + data.results)
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</td><td class="response">
<table><tr><td>
<input type="checkbox" name="bg_datamod" value="behav" />Behavioral<br />
+ <input type="checkbox" name="bg_datamod" value="genetic" />Genetic<br />
<input type="checkbox" name="bg_datamod" value="mri" />MRI/fMRI/DTI<br />
<input type="checkbox" name="bg_datamod" value="meeg" />EEG/MEG<br />
- </td><td>
<input type="checkbox" name="bg_datamod" value="pet" />PET/SPECT<br />
+ </td><td>
<input type="checkbox" name="bg_datamod" value="ephys" />Electrophysiology<br />
<input type="checkbox" name="bg_datamod" value="spectro" />Microspectroscopy<br />
+ <input type="checkbox" name="bg_datamod" value="simulation" />Computational modeling/Simulations<br />
<input type="checkbox" name="bg_datamod" value="otherdm" />
<input name="bg_datamod_other" type="text" size="20" maxlength="40">
</td></tr></table>
<td>
What fraction of your research activity time do you spend in this software
-environment as opposed to any other environment that you migh have access to?
+environment as opposed to any other environment that you might have access to?
.. raw:: html
</td></tr><tr class="oddrow"><td class="task">
-... of the availibility of commercial support
+... of the availability of commercial support
.. raw:: html
</td></tr><tr><td class="task">
-... I rely on a particular application that only runs in this environment
+... I rely on a particular application that runs in this environment only
.. raw:: html
<div class="rating">Definitely disagree<br /><input type="radio" name="man_r2" value="0" /></div>
</td></tr><tr class="oddrow"><td class="task">
-There are always enough licenses for essential commerical software tools
+There are always enough licenses for essential commercial software tools
.. raw:: html
.. raw:: html
- </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value=macports"" /></td><td>
+ </td></tr><tr><td class="response"><input type="checkbox" name="software_resource" value="macports" /></td><td>
`Macports <http://www.macports.org>`_
<table class="questionaire"><tr>
<td class="response"><input type="checkbox" name="sw_general" value="cpp" />C/C++</td>
+ <td class="response"><input type="checkbox" name="sw_general" value="fortran" />Fortran</td>
<td class="response"><input type="checkbox" name="sw_general" value="idl" />IDL</td>
+ <td class="response"><input type="checkbox" name="sw_general" value="java" />Java</td>
<td class="response"><input type="checkbox" name="sw_general" value="labview" />LabVIEW</td>
<td class="response"><input type="checkbox" name="sw_general" value="lisrel" />LISREL</td>
+ </tr><tr class="oddrow">
<td class="response"><input type="checkbox" name="sw_general" value="maple" />Maple</td>
<td class="response"><input type="checkbox" name="sw_general" value="mathcad" />Mathcad</td>
- </tr><tr class="oddrow">
<td class="response"><input type="checkbox" name="sw_general" value="mathematica" />Mathematica</td>
<td class="response"><input type="checkbox" name="sw_general" value="matlab" />Matlab</td>
<td class="response"><input type="checkbox" name="sw_general" value="octave" />Octave</td>
<td class="response"><input type="checkbox" name="sw_general" value="perl" />Perl</td>
+ </tr><tr>
<td class="response"><input type="checkbox" name="sw_general" value="python" />Python</td>
<td class="response"><input type="checkbox" name="sw_general" value="r" />R</td>
- </tr><tr>
<td class="response"><input type="checkbox" name="sw_general" value="ruby" />Ruby</td>
<td class="response"><input type="checkbox" name="sw_general" value="scilab" />Scilab</td>
<td class="response"><input type="checkbox" name="sw_general" value="spss" />SPSS</td>
<td class="response"><input type="checkbox" name="sw_general" value="scirun" />SCIRun</td>
+ </tr><tr class="oddrow">
<td class="response"><input type="checkbox" name="sw_general" value="shell" />Shell scripting</td>
</tr></table>
<td class="response"><input type="checkbox" name="sw_img" value="brainvisa" />BrainVISA/Anatomist</td>
<td class="response"><input type="checkbox" name="sw_img" value="brainvoyager" />BrainVoyager</td>
<td class="response"><input type="checkbox" name="sw_img" value="cmtk" />CMTK</td>
- <td class="response"><input type="checkbox" name="sw_img" value="caret" />Caret</td>
+ <td class="response"><input type="checkbox" name="sw_img" value="camino" />Camino</td>
</tr><tr class="oddrow">
+ <td class="response"><input type="checkbox" name="sw_img" value="caret" />Caret</td>
<td class="response"><input type="checkbox" name="sw_img" value="connectomviewer" />ConnectomeViewer</td>
<td class="response"><input type="checkbox" name="sw_img" value="dsi" />DSI Studio</td>
<td class="response"><input type="checkbox" name="sw_img" value="dtitk" />DTI-TK</td>
- <td class="response"><input type="checkbox" name="sw_img" value="trackvis" />Diffusion Toolkit/Trackvis</td>
</tr><tr>
+ <td class="response"><input type="checkbox" name="sw_img" value="trackvis" />Diffusion Toolkit/Trackvis</td>
<td class="response"><input type="checkbox" name="sw_img" value="fsl" />FSL</td>
<td class="response"><input type="checkbox" name="sw_img" value="fiji" />Fiji</td>
<td class="response"><input type="checkbox" name="sw_img" value="freesurfer" />FreeSurfer</td>
- <td class="response"><input type="checkbox" name="sw_img" value="itksnap" />ITK-SNAP</td>
</tr><tr class="oddrow">
+ <td class="response"><input type="checkbox" name="sw_img" value="itksnap" />ITK-SNAP</td>
<td class="response"><input type="checkbox" name="sw_img" value="imagej" />ImageJ</td>
<td class="response"><input type="checkbox" name="sw_img" value="invesalius" />Invesalius</td>
<td class="response"><input type="checkbox" name="sw_img" value="loni" />LONI</td>
- <td class="response"><input type="checkbox" name="sw_img" value="lipsia" />Lipsia</td>
</tr><tr>
+ <td class="response"><input type="checkbox" name="sw_img" value="lipsia" />Lipsia</td>
<td class="response"><input type="checkbox" name="sw_img" value="mango" />Mango</td>
<td class="response"><input type="checkbox" name="sw_img" value="mipav" />MIPAV/JIST</td>
<td class="response"><input type="checkbox" name="sw_img" value="mni" />MNI tools</td>
- <td class="response"><input type="checkbox" name="sw_img" value="mricron" />MRIcron</td>
</tr><tr class="oddrow">
+ <td class="response"><input type="checkbox" name="sw_img" value="mricron" />MRIcron</td>
<td class="response"><input type="checkbox" name="sw_img" value="mrtrix" />MRtrix</td>
<td class="response"><input type="checkbox" name="sw_img" value="mvpa" />Matlab MVPA toolbox</td>
<td class="response"><input type="checkbox" name="sw_img" value="nibabel" />NiBabel/PyNIfTI</td>
- <td class="response"><input type="checkbox" name="sw_img" value="nipy" />NiPy/NiTime/DiPy/NiPype</td>
</tr><tr>
+ <td class="response"><input type="checkbox" name="sw_img" value="nipy" />NiPy/NiTime/DiPy/NiPype</td>
<td class="response"><input type="checkbox" name="sw_img" value="pymvpa" />PyMVPA</td>
<td class="response"><input type="checkbox" name="sw_img" value="rest" />REST</td>
<td class="response"><input type="checkbox" name="sw_img" value="spm" />SPM</td>
- <td class="response"><input type="checkbox" name="sw_img" value="v3d" />V3D</td>
</tr><tr class="oddrow">
+ <td class="response"><input type="checkbox" name="sw_img" value="v3d" />V3D</td>
<td class="response"><input type="checkbox" name="sw_img" value="voxbo" />VoxBo</td>
</tr></table>
<table class="questionaire"><tr>
<td class="response"><input type="checkbox" name="sw_neusys" value="brian" />Brian</td>
- <td class="response"><input type="checkbox" name="sw_neusys" value="iqr" />iqr</td>
- <td class="response"><input type="checkbox" name="sw_neusys" value="iNVT" />iNVT</td>
- <td class="response"><input type="checkbox" name="sw_neusys" value="neuron" />NEURON</td>
- <td class="response"><input type="checkbox" name="sw_neusys" value="nest" />NEST</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="ecanse" />Siemens ECANSE</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="emergent" />Emergent NNSS</td>
<td class="response"><input type="checkbox" name="sw_neusys" value="genesis" />Genesis</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="iNVT" />iNVT</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="iqr" />iqr</td>
+ </tr><tr class="oddrow">
<td class="response"><input type="checkbox" name="sw_neusys" value="moose" />Moose</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="nengo" />Nengo</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="nest" />NEST</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="neuroml" />NeuroML</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="neuron" />NEURON</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="neurosolutions" />NeuroSolutions</td>
+ </tr><tr>
<td class="response"><input type="checkbox" name="sw_neusys" value="pcsim" />PCSIM</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="peltarion" />Peltarion</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="psics" />PSICS</td>
<td class="response"><input type="checkbox" name="sw_neusys" value="pynn" />PyNN</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="snnap" />SNNAP</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="snns" />SNNS</td>
+ </tr><tr class="oddrow">
<td class="response"><input type="checkbox" name="sw_neusys" value="topographica" />Topographica</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="xnbc" />XNBC</td>
+ <td class="response"><input type="checkbox" name="sw_neusys" value="xpp" />XPP/XPPAUT</td>
</tr></table>
Electrophysiology, MEG/EEG
.. raw:: html
<table class="questionaire"><tr>
+ <td class="response"><input type="checkbox" name="sw_electro" value="asa" />ASA</td>
<td class="response"><input type="checkbox" name="sw_electro" value="besa" />BESA</td>
<td class="response"><input type="checkbox" name="sw_electro" value="biosig" />BioSig</td>
<td class="response"><input type="checkbox" name="sw_electro" value="brainstorm" />BrainStorm</td>
- <td class="response"><input type="checkbox" name="sw_electro" value="chronus" />Chronus</td>
+ <td class="response"><input type="checkbox" name="sw_electro" value="brainsuite" />BrainSuite</td>
+ <td class="response"><input type="checkbox" name="sw_electro" value="brainvisionanalyzer" />Brainvision Analyzer</td>
+ </tr><tr class="oddrow">
+ <td class="response"><input type="checkbox" name="sw_electro" value="chronus" />Chronux</td>
<td class="response"><input type="checkbox" name="sw_electro" value="eeglab" />EEGLAB</td>
<td class="response"><input type="checkbox" name="sw_electro" value="elekta" />Elekta Neuromag</td>
- </tr><tr class="oddrow">
+ <td class="response"><input type="checkbox" name="sw_electro" value="emse" />EMSE</td>
<td class="response"><input type="checkbox" name="sw_electro" value="fieldtrip" />Fieldtrip</td>
+ <td class="response"><input type="checkbox" name="sw_electro" value="fmatoolbox" />FMAToolbox</td>
+ </tr><tr>
<td class="response"><input type="checkbox" name="sw_electro" value="klustakwik" />KlustaKwik</td>
+ <td class="response"><input type="checkbox" name="sw_electro" value="klusters" />Klusters</td>
<td class="response"><input type="checkbox" name="sw_electro" value="loreta" />LORETA/sLORETA</td>
+ <td class="response"><input type="checkbox" name="sw_electro" value="mclust" />MClust</td>
<td class="response"><input type="checkbox" name="sw_electro" value="mne" />MNE suite</td>
+ <td class="response"><input type="checkbox" name="sw_electro" value="ndmanager" />NDManager</td>
+ </tr><tr class="oddrow">
<td class="response"><input type="checkbox" name="sw_electro" value="neuroexplorer" />NeuroExplorer</td>
+ <td class="response"><input type="checkbox" name="sw_electro" value="neuroscan" />Neuroscan</td>
+ <td class="response"><input type="checkbox" name="sw_electro" value="neuroscope" />NeuroScope</td>
+ <td class="response"><input type="checkbox" name="sw_electro" value="neuroshare" />Neuroshare</td>
+ <td class="response"><input type="checkbox" name="sw_electro" value="openelectrophy" />Openelectrophy</td>
<td class="response"><input type="checkbox" name="sw_electro" value="openmeeg" />OpenMEEG</td>
</tr><tr>
- <td class="response"><input type="checkbox" name="sw_electro" value="openelectrophy" />Openelectrophy</td>
- <td class="response"><input type="checkbox" name="sw_electro" value="rtxi" />RTXI</td>
+ <td class="response"><input type="checkbox" name="sw_electro" value="plexon" />Plexon</td>
<td class="response"><input type="checkbox" name="sw_electro" value="relacs" />Relacs</td>
- <td class="response"><input type="checkbox" name="sw_electro" value="trellis" />?Trellis-neuro</td>
+ <td class="response"><input type="checkbox" name="sw_electro" value="rtxi" />RTXI</td>
+ <td class="response"><input type="checkbox" name="sw_electro" value="trellis" />Trellis-neuro</td>
</tr></table>
Brain-computer interface
.. raw:: html
<table class="questionaire"><tr>
+ <td class="response"><input type="checkbox" name="sw_psychphys" value="cogent" />Cogent</td>
<td class="response"><input type="checkbox" name="sw_psychphys" value="dmdx" />DMDX</td>
<td class="response"><input type="checkbox" name="sw_psychphys" value="eprime" />E-Prime</td>
+ <td class="response"><input type="checkbox" name="sw_psychphys" value="opensesame" />OpenSesame</td>
<td class="response"><input type="checkbox" name="sw_psychphys" value="presentation" />Presentation</td>
<td class="response"><input type="checkbox" name="sw_psychphys" value="psychopy" />PsychoPy</td>
- <td class="response"><input type="checkbox" name="sw_psychphys" value="pyepl" />PyEPL</td>
<td class="response"><input type="checkbox" name="sw_psychphys" value="psychtoolbox" />Psychtoolbox</td>
</tr><tr class="oddrow">
+ <td class="response"><input type="checkbox" name="sw_psychphys" value="psyscope" />PsyScope</td>
<td class="response"><input type="checkbox" name="sw_psychphys" value="psytoolkit" />Psytoolkit</td>
- <td class="response"><input type="checkbox" name="sw_psychphys" value="opensesame" />OpenSesame</td>
- <td class="response"><input type="checkbox" name="sw_psychphys" value="visionegg" />VisionEgg</td>
+ <td class="response"><input type="checkbox" name="sw_psychphys" value="pyepl" />PyEPL</td>
+ <td class="response"><input type="checkbox" name="sw_psychphys" value="superlab" />SuperLab</td>
<td class="response"><input type="checkbox" name="sw_psychphys" value="tscope" />Tscope</td>
+ <td class="response"><input type="checkbox" name="sw_psychphys" value="visionegg" />VisionEgg</td>
</tr></table>
Other
.. raw:: html
- <input id="submit_button" value="Submit survey" type="submit">
+ <!-- <input id="submit_button" value="Submit survey" type="submit">
<div id="server_response"></div>
+ -->
</form>