// ***************************************************************************
// bamtools_resolve.cpp (c) 2011
// Marth Lab, Department of Biology, Boston College
-// All rights reserved.
// ---------------------------------------------------------------------------
// Last modified: 6 July 2011
// ---------------------------------------------------------------------------
m_stream << OPTIONS_TOKEN << endl
<< OPTION_CONFIDENCEINTERVAL << EQUAL_CHAR << settings->ConfidenceInterval << endl
- << OPTION_MINIMUMMAPQUALITY << EQUAL_CHAR << settings->MinimumMapQuality << endl
<< OPTION_FORCEMARKREADGROUPS << EQUAL_CHAR << boolalpha << settings->HasForceMarkReadGroups << endl
+ << OPTION_MINIMUMMAPQUALITY << EQUAL_CHAR << settings->MinimumMapQuality << endl
<< OPTION_UNUSEDMODELTHRESHOLD << EQUAL_CHAR << settings->UnusedModelThreshold << endl
<< endl;
}