// Marth Lab, Department of Biology, Boston College
// All rights reserved.
// ---------------------------------------------------------------------------
-// Last modified: 7 April 2011
+// Last modified: 11 June 2011
// ---------------------------------------------------------------------------
// Converts between BAM and a number of other formats
// ***************************************************************************
// N.B. - QueryBases are reverse-complemented if aligned to reverse strand
// print header
- m_out << "> " << a.Name << endl;
+ m_out << ">" << a.Name << endl;
// handle reverse strand alignment - bases
string sequence = a.QueryBases;