// Marth Lab, Department of Biology, Boston College
// All rights reserved.
// ---------------------------------------------------------------------------
-// Last modified: 19 April 2011 (DB)
+// Last modified: 10 May 2011 (DB)
// ---------------------------------------------------------------------------
// Provides the basic functionality for producing BAM files
// ***************************************************************************
// write the base qualities
char* pBaseQualities = (char*)al.Qualities.data();
- for ( unsigned int i = 0; i < queryLength; i++ )
+ for ( unsigned int i = 0; i < queryLength; ++i )
pBaseQualities[i] -= 33; // FASTQ conversion
m_stream.Write(pBaseQualities, queryLength);