merge with remoteio branch

[bamtools.git] / src / api / BamMultiReader.cpp

diff --git a/src/api/BamMultiReader.cpp b/src/api/BamMultiReader.cpp
index 8712aadbb13cde63de00d792883edcc4cde23ce3..f61aa2648f372c7214df85a8cb38aa0f14631d07 100644 (file)
--- a/src/api/BamMultiReader.cpp
+++ b/src/api/BamMultiReader.cpp
@@ -2,7 +2,7 @@
 // BamMultiReader.cpp (c) 2010 Erik Garrison, Derek Barnett
 // Marth Lab, Department of Biology, Boston College
 // ---------------------------------------------------------------------------
-// Last modified: 10 October 2011 (DB)
+// Last modified: 25 October 2011 (DB)
 // ---------------------------------------------------------------------------
 // Convenience class for reading multiple BAM files.
 //
@@ -12,8 +12,8 @@
 // precludes the need to sort merged files.
 // ***************************************************************************
 
-#include <api/BamMultiReader.h>
-#include <api/internal/BamMultiReader_p.h>
+#include "api/BamMultiReader.h"
+#include "api/internal/bam/BamMultiReader_p.h"
 using namespace BamTools;
 
 #include <string>
@@ -321,19 +321,6 @@ bool BamMultiReader::Rewind(void) {
     return d->Rewind();
 }
 
-/*! \fn void BamMultiReader::SetIndexCacheMode(const BamIndex::IndexCacheMode& mode)
-    \brief Changes the caching behavior of the index data.
-
-    Default mode is BamIndex::LimitedIndexCaching.
-
-    \param[in] mode desired cache mode for index, see BamIndex::IndexCacheMode for
-                    description of the available cache modes
-    \sa HasIndex(), BamReader::SetIndexCacheMode()
-*/
-void BamMultiReader::SetIndexCacheMode(const BamIndex::IndexCacheMode& mode) {
-    d->SetIndexCacheMode(mode);
-}
-
 /*! \fn bool BamMultiReader::SetRegion(const BamRegion& region)
     \brief Sets a target region of interest