public:
SplitMatrix(string, string, string, float, string, bool); //column formatted distance file, namesfile, cutoff, method, large
- SplitMatrix(string, string, float, string); //fastafile, taxFile, cutoff, method
+ SplitMatrix(string, string, string, float, float, string, int, string); //fastafile, namefile, taxFile, taxcutoff, cutoff, method, processors, outputDir
~SplitMatrix();
int split();
private:
MothurOut* m;
- string distFile, namefile, singleton, method, taxFile, fastafile;
+ string distFile, namefile, singleton, method, taxFile, fastafile, outputDir;
vector< map< string, string> > dists;
- float cutoff;
+ float cutoff, distCutoff;
bool large;
+ int processors;
int splitDistance();
int splitClassify();