vector<string> setParameters();
string getCommandName() { return "remove.seqs"; }
string getCommandCategory() { return "Sequence Processing"; }
- string getHelpString();
+ string getOutputFileNameTag(string, string);
+ string getHelpString();
string getCitation() { return "http://www.mothur.org/wiki/Remove.seqs"; }
-
+ string getDescription() { return "removes sequences from a list, fasta, name, group, alignreport, quality or taxonomy file"; }
+
int execute();
void help() { m->mothurOut(getHelpString()); }
int readName();
int readGroup();
int readAlign();
- void readAccnos();
int readList();
int readTax();
int readQual();