* samtools.pl-0.2.1

[samtools.git] / misc / samtools.pl

diff --git a/misc/samtools.pl b/misc/samtools.pl
index 6fba900efce35bee3907a2725cee4c5127789d32..a26ac10f47ad76cc273966b6f5ec1e05889a715b 100755 (executable)
--- a/misc/samtools.pl
+++ b/misc/samtools.pl
@@ -6,7 +6,7 @@ use strict;
 use warnings;
 use Getopt::Std;
 
-my $version = '0.2.0';
+my $version = '0.2.1';
 &usage if (@ARGV < 1);
 
 my $command = shift(@ARGV);
@@ -82,7 +82,7 @@ Options: -D INT    maximum read depth [$opts{D}]
 
 sub snpFilter {
   my %opts = (f=>'', Q=>40, d=>3, w=>10, D=>0, N=>2, W=>10, q=>20, s=>50);
-  getopts('fs:w:q:Q:d:D:W:N:', \%opts);
+  getopts('f:s:w:q:Q:d:D:W:N:', \%opts);
   die(qq{
 Usage:   samtools.pl snpFilter [options] <cns2snp.snp>