private:
void printSims(ostream&);
- void process(vector<SharedRAbundVector*>);
+ int process(vector<SharedRAbundVector*>);
GlobalData* globaldata;
ReadOTUFile* read;
bool abort, allLines;
set<string> labels; //holds labels to be used
string outputFile, calc, groups, label, outputDir;
- vector<string> Estimators, Groups; //holds estimators to be used
+ vector<string> Estimators, Groups, outputNames; //holds estimators to be used
};