\alias{write.nexus}
\title{Write Tree File in Nexus Format}
\usage{
-write.nexus(..., file = "", translate = TRUE, original.data = TRUE)
+write.nexus(..., file = "", translate = TRUE)
}
\arguments{
\item{\dots}{either (i) a single object of class \code{"phylo"}, (ii) a
\item{translate}{a logical, if \code{TRUE} (the default) a translation
of the tip labels is done which are replaced in the parenthetic
representation with tokens.}
- \item{original.data}{a logical, if \code{TRUE} (the default) the
- data in the original NEXUS file are eventually written in
- \code{"file"} (see below).}
}
\description{
This function writes trees in a file with the NEXUS format.
}
\details{
- If \code{original.data = TRUE}, the file as specified by the attribute
- \code{"origin"} of the first tree is read and its data (except the
- trees) are written in \code{file}.
-
If several trees are given, they must have all the same tip labels.
If among the objects given some are not trees of class \code{"phylo"},
Biology}, \bold{46}, 590--621.
}
-\author{Emmanuel Paradis \email{Emmanuel.Paradis@mpl.ird.fr}}
+\author{Emmanuel Paradis}
\seealso{
\code{\link{read.nexus}}, \code{\link{read.tree}},
\code{\link{write.tree}}, \code{\link{read.nexus.data}},