adding the new function 'where'

[ape.git] / man / vcv.phylo.Rd

diff --git a/man/vcv.phylo.Rd b/man/vcv.phylo.Rd
index 7af6975cb1139a7dd3006ff904b092b1a37b023f..f48e5740a4e8de72f5810fdb9a5165614ddc98a8 100644 (file)
--- a/man/vcv.phylo.Rd
+++ b/man/vcv.phylo.Rd
@@ -1,4 +1,4 @@
-\name{vcv.phylo}
+\name{vcv}
 \alias{vcv}
 \alias{vcv.phylo}
 \alias{vcv.corPhyl}
@@ -11,7 +11,8 @@ vcv(phy, ...)
 \arguments{
   \item{phy}{an object of the correct class (see above).}
   \item{model}{a character giving the model used to compute the
-    variances and covariances; only \code{"Brownian"} is available.}
+    variances and covariances; only \code{"Brownian"} is available (for
+    other models, a correlation structure may be used).}
   \item{corr}{a logical indicating whether the correlation matrix should
     be returned (\code{TRUE}); by default the variance-covariance matrix
     is returned (\code{FALSE}).}
@@ -50,7 +51,6 @@ tr <- rtree(5)
 vcv(tr)
 vcv(corBrownian(1, tr))
 vcv(corPagel(1, tr))
-vcv(corPagel(0, tr))
 }
 \keyword{manip}
 \keyword{multivariate}