\alias{subtrees}
\title{All subtrees of a Phylogenetic Tree}
\usage{
-subtrees(x, wait=FALSE)
+subtrees(tree, wait=FALSE)
}
\arguments{
- \item{x}{an object of class \code{"phylo"}.}
+ \item{tree}{an object of class \code{"phylo"}.}
\item{wait}{a logical indicating whether the node beeing processed should be printed (useful for big phylogenies).}
}
\description{
This function returns a list of all the subtrees of a phylogenetic tree.
}
\author{Damien de Vienne \email{damien.de-vienne@u-psud.fr}}
-\see also{
+\seealso{
\code{\link{zoom}}, \code{\link{subtreeplot}} for functions extracting particular subtrees.
}
\value{
- \code{subtrees} returns a list of trees of class \code{"phylo"} and returns invisibly for each subtree a list with the following
+ \code{subtrees} returns a list of trees of class \code{"phylo"} and
+ returns invisibly for each subtree a list with the following
components:
- \item{tip.label}
- \item{node.label}
- \item{Ntip}
- \item{Nnode}
+ \item{tip.label}{}
+ \item{node.label}{}
+ \item{Ntip}{}
+ \item{Nnode}{}
}
\examples{
### Random tree with 12 leaves
for (i in 1:11) plot(l[[i]], sub=paste("Node", l[[i]]$node.label[1]))
par(mfrow=c(1,1))
}
+\keyword{manip}