change nlm to nlminb in ace() + new makeNodeLabel + fixed drop.tip

[ape.git] / man / plot.phylo.Rd

diff --git a/man/plot.phylo.Rd b/man/plot.phylo.Rd
index b9622effade18c75f51e094c2e97b44eb4bc8586..dcabb28e6abdc8e90bdbf0c5fc1117e4c3481376 100644 (file)
--- a/man/plot.phylo.Rd
+++ b/man/plot.phylo.Rd
@@ -184,16 +184,6 @@ plot(tree.owls, type = "c", use.edge.length = FALSE)
 plot(tree.owls, type = "u", use.edge.length = FALSE)
 layout(matrix(1))
 
-data(xenarthra)
-plot(xenarthra)
-### remove the margins...
-plot(xenarthra, no.margin = TRUE)
-### ... and use a smaller font size
-plot(xenarthra, no.margin = TRUE, cex = 0.8)
-plot(xenarthra, type = "c", no.margin = TRUE,
-     use.edge.length = FALSE, cex = 0.8)
-par(mar = c(5.1, 4.1, 4.1, 2.1))
-
 data(bird.orders)
 ### using random colours and thickness
 plot(bird.orders,